OpenMS
2.5.0
Main Page
Related Pages
Modules
Namespaces
Classes
Files
Class List
Class Index
Class Hierarchy
Class Members
OpenMS
RTSimulation
RTSimulation Member List
This is the complete list of members for
RTSimulation
, including all inherited members.
calculateMT_
(SimTypes::FeatureMapSim &features, std::vector< double > &predicted_retention_times)
RTSimulation
private
check_defaults_
DefaultParamHandler
protected
createExperiment
(SimTypes::MSSimExperiment &experiment)
RTSimulation
DefaultParamHandler
(const String &name)
DefaultParamHandler
DefaultParamHandler
(const DefaultParamHandler &rhs)
DefaultParamHandler
DefaultParamHandler
()
DefaultParamHandler
private
defaults_
DefaultParamHandler
protected
defaultsToParam_
()
DefaultParamHandler
protected
egh_tau_location_
RTSimulation
private
egh_tau_scale_
RTSimulation
private
egh_variance_location_
RTSimulation
private
egh_variance_scale_
RTSimulation
private
error_name_
DefaultParamHandler
protected
getChargeContribution_
(Map< String, double > &q_cterm, Map< String, double > &q_nterm, Map< String, double > &q_aa_basic, Map< String, double > &q_aa_acidic)
RTSimulation
private
getDefaults
() const
DefaultParamHandler
getGradientTime
() const
RTSimulation
getName
() const
DefaultParamHandler
getParameters
() const
DefaultParamHandler
getSubsections
() const
DefaultParamHandler
gradient_max_
RTSimulation
private
gradient_min_
RTSimulation
private
isRTColumnOn
() const
RTSimulation
noRTColumn_
(SimTypes::FeatureMapSim &)
RTSimulation
private
operator=
(const RTSimulation &source)
RTSimulation
OpenMS::DefaultParamHandler::operator=
(const DefaultParamHandler &rhs)
DefaultParamHandler
virtual
operator==
(const DefaultParamHandler &rhs) const
DefaultParamHandler
virtual
param_
DefaultParamHandler
protected
predictContaminantsRT
(SimTypes::FeatureMapSim &)
RTSimulation
predictRT
(SimTypes::FeatureMapSim &features)
RTSimulation
rnd_gen_
RTSimulation
protected
rt_model_file_
RTSimulation
private
rt_sampling_rate_
RTSimulation
private
RTSimulation
()
RTSimulation
RTSimulation
(SimTypes::MutableSimRandomNumberGeneratorPtr random_generator)
RTSimulation
explicit
RTSimulation
(const RTSimulation &source)
RTSimulation
setDefaultParams_
()
RTSimulation
private
setName
(const String &name)
DefaultParamHandler
setParameters
(const Param ¶m)
DefaultParamHandler
smoothRTDistortion_
(SimTypes::MSSimExperiment &experiment)
RTSimulation
private
subsections_
DefaultParamHandler
protected
total_gradient_time_
RTSimulation
private
updateMembers_
() override
RTSimulation
protected
virtual
warn_empty_defaults_
DefaultParamHandler
protected
wrapSVM
(std::vector< AASequence > &peptide_sequences, std::vector< double > &predicted_retention_times)
RTSimulation
~DefaultParamHandler
()
DefaultParamHandler
virtual
~RTSimulation
() override
RTSimulation
Generated on Sat Mar 7 2020 03:24:04 for OpenMS by
1.8.16