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OpenMS
ResidueDB
ResidueDB Member List
This is the complete list of members for
ResidueDB
, including all inherited members.
addResidue_
(Residue *residue)
ResidueDB
protected
beginResidue
()
ResidueDB
inline
beginResidue
() const
ResidueDB
inline
buildResidueNames_
()
ResidueDB
protected
clear_
()
ResidueDB
protected
clearResidueModifications_
()
ResidueDB
protected
clearResidues_
()
ResidueDB
protected
const_modified_residues_
ResidueDB
protected
const_residues_
ResidueDB
protected
endResidue
()
ResidueDB
inline
endResidue
() const
ResidueDB
inline
getInstance
()
ResidueDB
static
getModifiedResidue
(const String &name)
ResidueDB
getModifiedResidue
(const Residue *residue, const String &name)
ResidueDB
getNumberOfModifiedResidues
() const
ResidueDB
getNumberOfResidues
() const
ResidueDB
getResidue
(const String &name) const
ResidueDB
getResidue
(const unsigned char &one_letter_code) const
ResidueDB
getResidues
(const String &residue_set="All") const
ResidueDB
getResidueSets
() const
ResidueDB
hasResidue
(const String &name) const
ResidueDB
hasResidue
(const Residue *residue) const
ResidueDB
modified_residues_
ResidueDB
protected
operator=
(const ResidueDB &aa)
ResidueDB
protected
parseResidue_
(Map< String, String > &values)
ResidueDB
protected
readResiduesFromFile_
(const String &filename)
ResidueDB
protected
residue_by_one_letter_code_
ResidueDB
protected
residue_mod_names_
ResidueDB
protected
residue_names_
ResidueDB
protected
residue_sets_
ResidueDB
protected
ResidueConstIterator
typedef
ResidueDB
ResidueDB
()
ResidueDB
protected
ResidueDB
(const ResidueDB &residue_db)
ResidueDB
protected
ResidueIterator
typedef
ResidueDB
residues_
ResidueDB
protected
residues_by_set_
ResidueDB
protected
setResidues_
(const String &filename)
ResidueDB
protected
~ResidueDB
()
ResidueDB
virtual
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