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TOPPViewBase Member List

This is the complete list of members for TOPPViewBase, including all inherited members.

abortTOPPTool()TOPPViewBaseprotectedslot
add_2d_context_TOPPViewBaseprotected
addData(FeatureMapSharedPtrType feature_map, ConsensusMapSharedPtrType consensus_map, std::vector< PeptideIdentification > &peptides, ExperimentSharedPtrType peak_map, ODExperimentSharedPtrType on_disc_peak_map, LayerData::DataType data_type, bool show_as_1d, bool show_options, bool as_new_window=true, const String &filename="", const String &caption="", UInt window_id=0, Size spectrum_id=0)TOPPViewBase
addDataFile(const String &filename, bool show_options, bool add_to_recent, String caption="", UInt window_id=0, Size spectrum_id=0)TOPPViewBase
addRecentFile_(const String &filename)TOPPViewBaseprotected
annotateMS1FromMassFingerprinting_(const FeatureMap &identifications)TOPPViewBaseprotected
annotateWithID()TOPPViewBaseslot
CAPTION_3D_SUFFIX_TOPPViewBaseprivatestatic
changeLabel(QAction *)TOPPViewBaseslot
changeLayerFlag(bool)TOPPViewBaseslot
changeUnassigned(QAction *)TOPPViewBaseslot
check_defaults_DefaultParamHandlerprotected
checkPreferences_()TOPPViewBaseprotected
closeByTab(int id)TOPPViewBaseprotectedslot
closeEvent(QCloseEvent *event) overrideTOPPViewBaseprotected
closeFile()TOPPViewBaseslot
ConsensusMapSharedPtrType typedefTOPPViewBase
ConsensusMapType typedefTOPPViewBase
containsIMData(const MSSpectrum &s)TOPPViewBasestatic
containsMS1Scans(const ExperimentType &exp)TOPPViewBasestatic
copyLayer(const QMimeData *data, QWidget *source, int id=-1)TOPPViewBaseprotectedslot
current_path_TOPPViewBaseprotected
DefaultParamHandler(const String &name)DefaultParamHandler
DefaultParamHandler(const DefaultParamHandler &rhs)DefaultParamHandler
DefaultParamHandler()DefaultParamHandlerprivate
defaults_DefaultParamHandlerprotected
defaultsToParam_()DefaultParamHandlerprotected
dm_elements_2d_TOPPViewBaseprotected
dm_hull_2d_TOPPViewBaseprotected
dm_hulls_2d_TOPPViewBaseprotected
dm_ident_2d_TOPPViewBaseprotected
dm_label_2d_TOPPViewBaseprotected
dm_precursors_2d_TOPPViewBaseprotected
dm_unassigned_2d_TOPPViewBaseprotected
draw_group_1d_TOPPViewBaseprotected
editMetadata()TOPPViewBaseslot
enhancedWorkspaceWindowChanged(int id)TOPPViewBaseprotectedslot
error_name_DefaultParamHandlerprotected
estimateNoiseFromRandomMS1Scans(const ExperimentType &exp, UInt n_scans=10)TOPPViewBase
ExperimentSharedPtrType typedefTOPPViewBase
ExperimentType typedefTOPPViewBase
FeatureMapSharedPtrType typedefTOPPViewBase
FeatureMapType typedefTOPPViewBase
fileChanged_(const String &)TOPPViewBaseprotectedslot
filter_dock_widget_TOPPViewBaseprotected
filterContextMenu(const QPoint &pos)TOPPViewBaseprotectedslot
filterEdit(QListWidgetItem *item)TOPPViewBaseprotectedslot
filters_TOPPViewBaseprotected
filters_check_box_TOPPViewBaseprotected
finishTOPPToolExecution(int exitCode, QProcess::ExitStatus exitStatus)TOPPViewBaseprotectedslot
getActive1DWidget() constTOPPViewBase
getActive2DWidget() constTOPPViewBase
getActive3DWidget() constTOPPViewBase
getActiveCanvas() constTOPPViewBase
getActiveSpectrumWidget() constTOPPViewBase
getCurrentLayer() constTOPPViewBase
getDefaults() constDefaultParamHandler
getFileList_(const String &path_overwrite="")TOPPViewBaseprotected
getFilenamesOfOpenFiles_()TOPPViewBaseprotected
getName() constDefaultParamHandler
getParameters() constDefaultParamHandler
getSpectraIdentificationViewWidget()TOPPViewBase
getSpectrumParameters(UInt dim)TOPPViewBase
getSubsections() constDefaultParamHandler
getWorkspace() constTOPPViewBase
group_label_2d_TOPPViewBaseprotected
group_unassigned_2d_TOPPViewBaseprotected
hasMS1Zeros(const ExperimentType &exp)TOPPViewBasestatic
hasPeptideIdentifications(const ExperimentType &map)TOPPViewBasestatic
identificationview_behavior_TOPPViewBaseprotected
initializeDefaultParameters_()TOPPViewBaseprotected
intensity_button_group_TOPPViewBaseprotected
layer_dock_widget_TOPPViewBaseprotected
layerActivated()TOPPViewBaseslot
layerContextMenu(const QPoint &pos)TOPPViewBaseprotectedslot
layerDeactivated()TOPPViewBaseslot
layerEdit(QListWidgetItem *)TOPPViewBaseprotectedslot
layerFilterVisibilityChange(bool)TOPPViewBaseprotectedslot
layers_view_TOPPViewBaseprotected
layerSelectionChange(int)TOPPViewBaseprotectedslot
layerStatistics()TOPPViewBaseslot
layerVisibilityChange(QListWidgetItem *item)TOPPViewBaseprotectedslot
layerZoomChanged()TOPPViewBaseslot
linkZoom()TOPPViewBaseslot
linkZoom_action_TOPPViewBaseprotected
loadFile(QString)TOPPViewBaseslot
loadFiles(const StringList &list, QSplashScreen *splash_screen)TOPPViewBase
loadPreferences(String filename="")TOPPViewBase
log_TOPPViewBaseprotected
logContextMenu(const QPoint &pos)TOPPViewBaseprotectedslot
LogState enum nameTOPPViewBaseprotected
LS_ERROR enum valueTOPPViewBaseprotected
LS_NOTICE enum valueTOPPViewBaseprotected
LS_WARNING enum valueTOPPViewBaseprotected
message_label_TOPPViewBaseprotected
metadataFileDialog()TOPPViewBaseslot
mz_label_TOPPViewBaseprotected
ODExperimentSharedPtrType typedefTOPPViewBase
openExampleDialog()TOPPViewBaseslot
openFileDialog()TOPPViewBaseslot
openRecentFile()TOPPViewBaseprotectedslot
operator=(const DefaultParamHandler &rhs)DefaultParamHandlervirtual
operator==(const DefaultParamHandler &rhs) constDefaultParamHandlervirtual
param_DefaultParamHandlerprotected
preferencesDialog()TOPPViewBaseslot
projections_2d_TOPPViewBaseprotected
recent_actions_TOPPViewBaseprotected
recent_files_TOPPViewBaseprotected
rerunTOPPTool()TOPPViewBaseprotectedslot
resetZoom()TOPPViewBaseslot
rt_label_TOPPViewBaseprotected
runTOPPTool_()TOPPViewBaseprotected
saveLayerAll()TOPPViewBaseslot
saveLayerVisible()TOPPViewBaseslot
savePreferences()TOPPViewBase
setDrawMode1D(int)TOPPViewBaseslot
setIntensityMode(int)TOPPViewBaseslot
setName(const String &name)DefaultParamHandler
setParameters(const Param &param)DefaultParamHandler
showAboutDialog()TOPPViewBaseslot
showCurrentPeaksAs2D()TOPPViewBaseslot
showCurrentPeaksAs3D()TOPPViewBaseslot
showCurrentPeaksAsDIA()TOPPViewBaseslot
showCurrentPeaksAsIonMobility()TOPPViewBaseslot
showCursorStatus(double mz, double rt)TOPPViewBaseslot
showCursorStatusInvert(double mz, double rt)TOPPViewBaseslot
showGoToDialog()TOPPViewBaseslot
showLogMessage_(LogState state, const String &heading, const String &body)TOPPViewBaseprotected
showPreferences()TOPPViewBaseslot
showSpectrumAlignmentDialog()TOPPViewBaseslot
showSpectrumAs1D(int index)TOPPViewBaseslot
showSpectrumAs1D(std::vector< int, std::allocator< int > > indices)TOPPViewBaseslot
showSpectrumBrowser()TOPPViewBaseprotectedslot
showSpectrumGenerationDialog()TOPPViewBaseslot
showSpectrumMetaData(int spectrum_index)TOPPViewBaseprotectedslot
showSpectrumWidgetInWindow(SpectrumWidget *sw, const String &caption)TOPPViewBase
showStatusMessage(std::string msg, OpenMS::UInt time)TOPPViewBaseslot
showTOPPDialog()TOPPViewBaseslot
showTOPPDialog_(bool visible)TOPPViewBaseprotected
showURL()TOPPViewBaseslot
spectra_identification_view_widget_TOPPViewBaseprotected
spectra_view_widget_TOPPViewBaseprotected
spectraview_behavior_TOPPViewBaseprotected
SpectrumType typedefTOPPViewBase
subsections_DefaultParamHandlerprotected
tab_bar_TOPPViewBaseprotected
TestTOPPView classTOPPViewBasefriend
tileHorizontal()TOPPViewBaseslot
tileVertical()TOPPViewBaseslot
toggleAxisLegends()TOPPViewBaseslot
toggleGridLines()TOPPViewBaseslot
toggleInterestingMZs()TOPPViewBaseslot
toggleProjections()TOPPViewBaseslot
tool_bar_TOPPViewBaseprotected
tool_bar_1d_TOPPViewBaseprotected
tool_bar_2d_cons_TOPPViewBaseprotected
tool_bar_2d_feat_TOPPViewBaseprotected
tool_bar_2d_ident_TOPPViewBaseprotected
tool_bar_2d_peak_TOPPViewBaseprotected
topp_TOPPViewBaseprotected
TOPPViewBase(QWidget *parent=nullptr)TOPPViewBase
updateCurrentPath()TOPPViewBaseslot
updateFilterBar()TOPPViewBaseslot
updateLayerBar()TOPPViewBaseslot
updateMembers_()DefaultParamHandlerprotectedvirtual
updateMenu()TOPPViewBaseslot
updateProcessLog()TOPPViewBaseprotectedslot
updateRecentMenu_()TOPPViewBaseprotected
updateTabBar(QMdiSubWindow *w)TOPPViewBaseslot
updateToolBar()TOPPViewBaseslot
updateViewBar()TOPPViewBaseslot
viewChanged(int)TOPPViewBaseslot
views_dockwidget_TOPPViewBaseprotected
views_tabwidget_TOPPViewBaseprotected
viewTabwidgetDoubleClicked(int)TOPPViewBaseslot
warn_empty_defaults_DefaultParamHandlerprotected
watcher_TOPPViewBaseprotected
watcher_msgbox_TOPPViewBaseprotected
window_(int id) constTOPPViewBaseprotected
ws_TOPPViewBaseprotected
zoom_together_TOPPViewBaseprotected
~DefaultParamHandler()DefaultParamHandlervirtual
~TOPPViewBase() overrideTOPPViewBase
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