accessionEqual_(const ProteinHit &p1, const ProteinHit &p2) | ConsensusMapMergerAlgorithm | inlineprivatestatic |
accessionHash_(const ProteinHit &p) | ConsensusMapMergerAlgorithm | inlineprivatestatic |
check_defaults_ | DefaultParamHandler | protected |
checkOldRunConsistency_(const std::vector< ProteinIdentification > &protRuns, const String &experiment_type) const | ConsensusMapMergerAlgorithm | private |
checkOldRunConsistency_(const std::vector< ProteinIdentification > &protRuns, const ProteinIdentification &ref, const String &experiment_type) const | ConsensusMapMergerAlgorithm | private |
CMD enum value | ProgressLogger | |
ConsensusMapMergerAlgorithm() | ConsensusMapMergerAlgorithm | |
current_logger_ | ProgressLogger | mutableprotected |
DefaultParamHandler(const String &name) | DefaultParamHandler | |
DefaultParamHandler(const DefaultParamHandler &rhs) | DefaultParamHandler | |
DefaultParamHandler() | DefaultParamHandler | private |
defaults_ | DefaultParamHandler | protected |
defaultsToParam_() | DefaultParamHandler | protected |
endProgress() const | ProgressLogger | |
equal_type typedef | ConsensusMapMergerAlgorithm | private |
error_name_ | DefaultParamHandler | protected |
getDefaults() const | DefaultParamHandler | |
getLogType() const | ProgressLogger | |
getName() const | DefaultParamHandler | |
getParameters() const | DefaultParamHandler | |
getSubsections() const | DefaultParamHandler | |
GUI enum value | ProgressLogger | |
hash_type typedef | ConsensusMapMergerAlgorithm | private |
last_invoke_ | ProgressLogger | mutableprotected |
LogType enum name | ProgressLogger | |
logTypeToFactoryName_(LogType type) | ProgressLogger | protectedstatic |
mergeAllIDRuns(ConsensusMap &cmap) const | ConsensusMapMergerAlgorithm | |
mergeProteinIDRuns(ConsensusMap &cmap, const std::map< unsigned, unsigned > &mapIdx_to_new_protIDRun) const | ConsensusMapMergerAlgorithm | |
mergeProteinsAcrossFractionsAndReplicates(ConsensusMap &cmap, const ExperimentalDesign &exp_design) const | ConsensusMapMergerAlgorithm | |
nextProgress() const | ProgressLogger | |
NONE enum value | ProgressLogger | |
OpenMS::operator=(const DefaultParamHandler &rhs) | DefaultParamHandler | virtual |
OpenMS::ProgressLogger::operator=(const ProgressLogger &other) | ProgressLogger | |
operator==(const DefaultParamHandler &rhs) const | DefaultParamHandler | virtual |
param_ | DefaultParamHandler | protected |
ProgressLogger() | ProgressLogger | |
ProgressLogger(const ProgressLogger &other) | ProgressLogger | |
recursion_depth_ | ProgressLogger | protectedstatic |
setLogType(LogType type) const | ProgressLogger | |
setName(const String &name) | DefaultParamHandler | |
setParameters(const Param ¶m) | DefaultParamHandler | |
setProgress(SignedSize value) const | ProgressLogger | |
startProgress(SignedSize begin, SignedSize end, const String &label) const | ProgressLogger | |
subsections_ | DefaultParamHandler | protected |
type_ | ProgressLogger | mutableprotected |
updateMembers_() | DefaultParamHandler | protectedvirtual |
warn_empty_defaults_ | DefaultParamHandler | protected |
writeParametersToMetaValues(const Param &write_this, MetaInfoInterface &write_here, const String &prefix="") | DefaultParamHandler | static |
~DefaultParamHandler() | DefaultParamHandler | virtual |
~ProgressLogger() | ProgressLogger | |