check_defaults_ | DefaultParamHandler | protected |
CMD enum value | ProgressLogger | |
computeHyperScore(double fragment_mass_error, bool fragment_mass_tolerance_unit_ppm, const MSSpectrum &exp_spectrum, const MSSpectrum &db_spectrum, double mz_lower_bound=0.0) | MetaboliteSpectralMatching | static |
computeHyperScore(double fragment_mass_error, bool fragment_mass_tolerance_unit_ppm, const MSSpectrum &exp_spectrum, const MSSpectrum &db_spectrum, std::vector< PeptideHit::PeakAnnotation > &annotations, double mz_lower_bound=0.0) | MetaboliteSpectralMatching | static |
computeHyperScore_(double fragment_mass_error, bool fragment_mass_tolerance_unit_ppm, const MSSpectrum &exp_spectrum, const MSSpectrum &db_spectrum, std::vector< PeptideHit::PeakAnnotation > *annotations=0, double mz_lower_bound=0.0) | MetaboliteSpectralMatching | protectedstatic |
current_logger_ | ProgressLogger | mutableprotected |
DefaultParamHandler(const String &name) | DefaultParamHandler | |
DefaultParamHandler(const DefaultParamHandler &rhs) | DefaultParamHandler | |
DefaultParamHandler() | DefaultParamHandler | private |
defaults_ | DefaultParamHandler | protected |
defaultsToParam_() | DefaultParamHandler | protected |
endProgress() const | ProgressLogger | |
error_name_ | DefaultParamHandler | protected |
exportMzTab_(const std::vector< SpectralMatch > &, MzTab &) | MetaboliteSpectralMatching | private |
fragment_mz_error_ | MetaboliteSpectralMatching | private |
getDefaults() const | DefaultParamHandler | |
getLogType() const | ProgressLogger | |
getName() const | DefaultParamHandler | |
getParameters() const | DefaultParamHandler | |
getSubsections() const | DefaultParamHandler | |
GUI enum value | ProgressLogger | |
ion_mode_ | MetaboliteSpectralMatching | private |
last_invoke_ | ProgressLogger | mutableprotected |
LogType enum name | ProgressLogger | |
logTypeToFactoryName_(LogType type) | ProgressLogger | protectedstatic |
MetaboliteSpectralMatching() | MetaboliteSpectralMatching | |
mz_error_unit_ | MetaboliteSpectralMatching | private |
nextProgress() const | ProgressLogger | |
NONE enum value | ProgressLogger | |
OpenMS::operator=(const DefaultParamHandler &rhs) | DefaultParamHandler | virtual |
OpenMS::ProgressLogger::operator=(const ProgressLogger &other) | ProgressLogger | |
operator==(const DefaultParamHandler &rhs) const | DefaultParamHandler | virtual |
param_ | DefaultParamHandler | protected |
precursor_mz_error_ | MetaboliteSpectralMatching | private |
ProgressLogger() | ProgressLogger | |
ProgressLogger(const ProgressLogger &other) | ProgressLogger | |
recursion_depth_ | ProgressLogger | protectedstatic |
report_mode_ | MetaboliteSpectralMatching | private |
run(PeakMap &, PeakMap &, MzTab &) | MetaboliteSpectralMatching | |
setLogType(LogType type) const | ProgressLogger | |
setName(const String &name) | DefaultParamHandler | |
setParameters(const Param ¶m) | DefaultParamHandler | |
setProgress(SignedSize value) const | ProgressLogger | |
startProgress(SignedSize begin, SignedSize end, const String &label) const | ProgressLogger | |
subsections_ | DefaultParamHandler | protected |
type_ | ProgressLogger | mutableprotected |
updateMembers_() override | MetaboliteSpectralMatching | protectedvirtual |
warn_empty_defaults_ | DefaultParamHandler | protected |
writeParametersToMetaValues(const Param &write_this, MetaInfoInterface &write_here, const String &prefix="") | DefaultParamHandler | static |
~DefaultParamHandler() | DefaultParamHandler | virtual |
~MetaboliteSpectralMatching() override | MetaboliteSpectralMatching | |
~ProgressLogger() | ProgressLogger | |