OpenMS
2.6.0
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This is the complete list of members for XQuestResultXMLFile, including all inherited members.
CMD enum value | ProgressLogger | |
current_logger_ | ProgressLogger | mutableprotected |
endProgress() const | ProgressLogger | |
enforced_encoding_ | XMLFile | protected |
enforceEncoding_(const String &encoding) | XMLFile | protected |
getLogType() const | ProgressLogger | |
getMaxScore() const | XQuestResultXMLFile | |
getMinScore() const | XQuestResultXMLFile | |
getNumberOfHits() const | XQuestResultXMLFile | |
getVersion() const | XMLFile | |
getxQuestBase64EncodedSpectrum_(const PeakSpectrum &spec, String header) | XQuestResultXMLFile | privatestatic |
GUI enum value | ProgressLogger | |
isValid(const String &filename, std::ostream &os) | XMLFile | |
last_invoke_ | ProgressLogger | mutableprotected |
load(const String &filename, std::vector< PeptideIdentification > &pep_ids, std::vector< ProteinIdentification > &prot_ids) | XQuestResultXMLFile | |
LogType enum name | ProgressLogger | |
logTypeToFactoryName_(LogType type) | ProgressLogger | protectedstatic |
max_score_ | XQuestResultXMLFile | private |
min_score_ | XQuestResultXMLFile | private |
n_hits_ | XQuestResultXMLFile | private |
nextProgress() const | ProgressLogger | |
NONE enum value | ProgressLogger | |
operator=(const ProgressLogger &other) | ProgressLogger | |
parse_(const String &filename, XMLHandler *handler) | XMLFile | protected |
parseBuffer_(const std::string &buffer, XMLHandler *handler) | XMLFile | protected |
ProgressLogger() | ProgressLogger | |
ProgressLogger(const ProgressLogger &other) | ProgressLogger | |
recursion_depth_ | ProgressLogger | protectedstatic |
save_(const String &filename, XMLHandler *handler) const | XMLFile | protected |
schema_location_ | XMLFile | protected |
schema_version_ | XMLFile | protected |
setLogType(LogType type) const | ProgressLogger | |
setProgress(SignedSize value) const | ProgressLogger | |
startProgress(SignedSize begin, SignedSize end, const String &label) const | ProgressLogger | |
store(const String &filename, const std::vector< ProteinIdentification > &poid, const std::vector< PeptideIdentification > &peid) const | XQuestResultXMLFile | |
type_ | ProgressLogger | mutableprotected |
wrap_(const String &input, Size width, String &output) | XQuestResultXMLFile | privatestatic |
writeXQuestXMLSpec(const String &out_file, const String &base_name, const OPXLDataStructs::PreprocessedPairSpectra &preprocessed_pair_spectra, const std::vector< std::pair< Size, Size > > &spectrum_pairs, const std::vector< std::vector< OPXLDataStructs::CrossLinkSpectrumMatch > > &all_top_csms, const PeakMap &spectra) | XQuestResultXMLFile | static |
writeXQuestXMLSpec(const String &out_file, const String &base_name, const std::vector< std::vector< OPXLDataStructs::CrossLinkSpectrumMatch > > &all_top_csms, const PeakMap &spectra) | XQuestResultXMLFile | static |
XMLFile() | XMLFile | |
XMLFile(const String &schema_location, const String &version) | XMLFile | |
XQuestResultXMLFile() | XQuestResultXMLFile | |
~ProgressLogger() | ProgressLogger | |
~XMLFile() | XMLFile | virtual |
~XQuestResultXMLFile() override | XQuestResultXMLFile |