46 class ProteinIdentification;
89 void load(
const std::string & result_filename, std::vector<PeptideIdentification> & peptide_identifications,
91 const double & score_threshold,
93 const std::map<String, String> & mod_id_map);
Representation of a PepNovo output file.
Definition: PepNovoOutfile.h:57
void getSearchEngineAndVersion(const String &pepnovo_output_without_parameters_filename, ProteinIdentification &protein_identification)
get the search engine version and search parameters from a PepNovo output file
PepNovoOutfile & operator=(const PepNovoOutfile &pepnovo_outfile)
assignment operator
std::map< Size, std::pair< double, double > > IndexPosMappingType
Definition: PepNovoOutfile.h:60
virtual ~PepNovoOutfile()
destructor
void load(const std::string &result_filename, std::vector< PeptideIdentification > &peptide_identifications, ProteinIdentification &protein_identification, const double &score_threshold, const IndexPosMappingType &id_rt_mz, const std::map< String, String > &mod_id_map)
loads data from a PepNovo outfile
bool operator==(const PepNovoOutfile &pepnovo_outfile) const
equality operator
PepNovoOutfile()
Constructor.
PepNovoOutfile(const PepNovoOutfile &pepnovo_outfile)
copy constructor
Representation of a protein identification run.
Definition: ProteinIdentification.h:72
A more convenient string class.
Definition: String.h:60
Main OpenMS namespace.
Definition: FeatureDeconvolution.h:47