IdentificationData::RefTranslator Struct Reference

structure that maps references of corresponding objects after copying More...

#include <OpenMS/METADATA/ID/IdentificationData.h>

Collaboration diagram for IdentificationData::RefTranslator:

Public Member Functions
IdentifiedMolecule	translate (IdentifiedMolecule old) const
ObservationMatchRef	translate (ObservationMatchRef old) const

Public Attributes
std::map< InputFileRef, InputFileRef >	input_file_refs
std::map< ScoreTypeRef, ScoreTypeRef >	score_type_refs
std::map< ProcessingSoftwareRef, ProcessingSoftwareRef >	processing_software_refs
std::map< SearchParamRef, SearchParamRef >	search_param_refs
std::map< ProcessingStepRef, ProcessingStepRef >	processing_step_refs
std::map< ObservationRef, ObservationRef >	observation_refs
std::map< ParentSequenceRef, ParentSequenceRef >	parent_sequence_refs
std::map< IdentifiedPeptideRef, IdentifiedPeptideRef >	identified_peptide_refs
std::map< IdentifiedOligoRef, IdentifiedOligoRef >	identified_oligo_refs
std::map< IdentifiedCompoundRef, IdentifiedCompoundRef >	identified_compound_refs
std::map< AdductRef, AdductRef >	adduct_refs
std::map< ObservationMatchRef, ObservationMatchRef >	observation_match_refs
bool	allow_missing = false

Detailed Description

structure that maps references of corresponding objects after copying

Member Function Documentation

translate() [1/2]

IdentifiedMolecule translate ( IdentifiedMolecule  old ) const

inline

References OpenMS::IdentificationDataInternal::COMPOUND, IdentifiedMolecule::getIdentifiedCompoundRef(), IdentifiedMolecule::getIdentifiedOligoRef(), IdentifiedMolecule::getIdentifiedPeptideRef(), IdentifiedMolecule::getMoleculeType(), OpenMS::IdentificationDataInternal::PROTEIN, and OpenMS::IdentificationDataInternal::RNA.

translate() [2/2]

ObservationMatchRef translate ( ObservationMatchRef  old ) const

inline

Member Data Documentation

adduct_refs

std::map<AdductRef, AdductRef> adduct_refs

allow_missing

bool allow_missing = false

identified_compound_refs

std::map<IdentifiedCompoundRef, IdentifiedCompoundRef> identified_compound_refs

identified_oligo_refs

std::map<IdentifiedOligoRef, IdentifiedOligoRef> identified_oligo_refs

identified_peptide_refs

std::map<IdentifiedPeptideRef, IdentifiedPeptideRef> identified_peptide_refs

input_file_refs

std::map<InputFileRef, InputFileRef> input_file_refs

observation_match_refs

std::map<ObservationMatchRef, ObservationMatchRef> observation_match_refs

observation_refs

std::map<ObservationRef, ObservationRef> observation_refs

parent_sequence_refs

std::map<ParentSequenceRef, ParentSequenceRef> parent_sequence_refs

processing_software_refs

std::map<ProcessingSoftwareRef, ProcessingSoftwareRef> processing_software_refs

processing_step_refs

std::map<ProcessingStepRef, ProcessingStepRef> processing_step_refs

score_type_refs

std::map<ScoreTypeRef, ScoreTypeRef> score_type_refs

search_param_refs

std::map<SearchParamRef, SearchParamRef> search_param_refs