GaussFilter.h

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// --------------------------------------------------------------------------
//                   OpenMS -- Open-Source Mass Spectrometry
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// Copyright The OpenMS Team -- Eberhard Karls University Tuebingen,
// ETH Zurich, and Freie Universitaet Berlin 2002-2023.
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// $Maintainer: Timo Sachsenberg $
// $Authors: Eva Lange $
// --------------------------------------------------------------------------
 
#pragma once
 
#include <OpenMS/CONCEPT/Constants.h>
#include <OpenMS/CONCEPT/ProgressLogger.h>
#include <OpenMS/DATASTRUCTURES/DefaultParamHandler.h>
#include <OpenMS/FILTERING/SMOOTHING/GaussFilterAlgorithm.h>
#include <OpenMS/KERNEL/StandardTypes.h>
 
namespace OpenMS
{
//#define DEBUG_FILTERING
 
  class OPENMS_DLLAPI GaussFilter :
    public ProgressLogger,
    public DefaultParamHandler
  {
public:
    GaussFilter();
 
    ~GaussFilter() override = default;
 
    void filter(MSSpectrum & spectrum);
 
    void filter(MSChromatogram & chromatogram);
 
    void filterExperiment(PeakMap & map);
 
protected:
 
    GaussFilterAlgorithm gauss_algo_;
 
    double spacing_;
 
    bool write_log_messages_ = false;
 
    // Docu in base class
    void updateMembers_() override;
  };
 
} // namespace OpenMS