OpenMS
3.0.0
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- a -
a0 :
OpenMS::Constants
AAtoChar :
OpenMS
absdiff :
OpenMS::Internal::ClassTest
absdiff_max :
OpenMS::Internal::ClassTest
absdiff_max_allowed :
OpenMS::Internal::ClassTest
add_message :
OpenMS::Internal::ClassTest
ADDUCT_GROUP :
OpenMS::Constants::UserParam
all_tests :
OpenMS::Internal::ClassTest
AVOGADRO :
OpenMS::Constants
- b -
BinaryDataEncoder_default_numpressErrorTolerance :
OpenMS
BK_PrecPolicyDouble :
OpenMS::StringConversions
BK_PrecPolicyFloat :
OpenMS::StringConversions
BK_PrecPolicyLongDouble :
OpenMS::StringConversions
blue :
OpenMS
BOHR_RADIUS :
OpenMS::Constants
BOLTZMANN :
OpenMS::Constants
bright :
OpenMS
- c -
c :
OpenMS::Constants
C13C12_MASSDIFF_U :
OpenMS::Constants
CAL_PER_JOULE :
OpenMS::Constants
CharToAA :
OpenMS
CONCAT_PEPTIDE :
OpenMS::Constants::UserParam
CURRENT_VERSION :
OpenMS::SiriusVersion
CUT_LAMBDA_BREAK_0_1 :
OpenMS::Constants
CUT_LAMBDA_BREAK_1_2 :
OpenMS::Constants
CUT_LAMBDA_L_2_A :
OpenMS::Constants
CUT_LAMBDA_L_2_B :
OpenMS::Constants
CUT_LAMBDA_Q_0_A :
OpenMS::Constants
CUT_LAMBDA_Q_0_B :
OpenMS::Constants
CUT_LAMBDA_Q_0_C :
OpenMS::Constants
CUT_LAMBDA_Q_1_A :
OpenMS::Constants
CUT_LAMBDA_Q_1_B :
OpenMS::Constants
CUT_LAMBDA_Q_1_C :
OpenMS::Constants
cyan :
OpenMS
- d -
DC_CHARGE_ADDUCTS :
OpenMS::Constants::UserParam
DEFAULT_NUM_OF_INTERPOLATION_POINTS :
OpenMS::Constants
DEG_PER_RAD :
OpenMS::Constants
DELTA_SCORE :
OpenMS::Constants::UserParam
DIM_NAMES :
OpenMS
DIM_NAMES_SHORT :
OpenMS
- e -
E :
OpenMS::Constants
e0 :
OpenMS::Constants
ELECTRON_MASS :
OpenMS::Constants
ELECTRON_MASS_U :
OpenMS::Constants
ELEMENTARY_CHARGE :
OpenMS::Constants
EPSILON :
OpenMS::Constants
equal_files :
OpenMS::Internal::ClassTest
exception :
OpenMS::Internal::ClassTest
exception_message :
OpenMS::Internal::ClassTest
exception_name :
OpenMS::Internal::ClassTest
- f -
F :
OpenMS::Constants
failed_lines_list :
OpenMS::Internal::ClassTest
FARADAY :
OpenMS::Constants
FINE_STRUCTURE_CONSTANT :
OpenMS::Constants
FRAGMENT_ANNOTATION_USERPARAM :
OpenMS::Constants::UserParam
FRAGMENT_ERROR_DA_USERPARAM :
OpenMS::Constants::UserParam
FRAGMENT_ERROR_MEDIAN_PPM_USERPARAM :
OpenMS::Constants::UserParam
FRAGMENT_ERROR_PPM_USERPARAM :
OpenMS::Constants::UserParam
fuzzy_message :
OpenMS::Internal::ClassTest
- g -
GAS_CONSTANT :
OpenMS::Constants
GRAVITATIONAL_CONSTANT :
OpenMS::Constants
green :
OpenMS
- h -
h :
OpenMS::Constants
- i -
ID_MERGE_INDEX :
OpenMS::Constants::UserParam
IIMN_ADDUCT_PARTNERS :
OpenMS::Constants::UserParam
IIMN_ANNOTATION_NETWORK_NUMBER :
OpenMS::Constants::UserParam
IIMN_BEST_ION :
OpenMS::Constants::UserParam
IIMN_LINKED_GROUPS :
OpenMS::Constants::UserParam
IIMN_ROW_ID :
OpenMS::Constants::UserParam
infile :
OpenMS::Internal::ClassTest
invert :
OpenMS
ISOTOPE_ERROR :
OpenMS::Constants::UserParam
ISOTOPE_MASSDIFF_55K_U :
OpenMS::Constants
IW_HALF_NEUTRON_MASS :
OpenMS::Constants
IW_NEUTRON_MASS :
OpenMS::Constants
IW_PROTON_MASS :
OpenMS::Constants
IW_QUARTER_NEUTRON_MASS :
OpenMS::Constants
- j -
JOULE_PER_CAL :
OpenMS::Constants
- k -
k :
OpenMS::Constants
- l -
LAMBDA_L_0 :
OpenMS::Constants
LAMBDA_L_1 :
OpenMS::Constants
line_buffer :
OpenMS::Internal::ClassTest
line_num_1_max :
OpenMS::Internal::ClassTest
line_num_2_max :
OpenMS::Internal::ClassTest
LOCALIZED_MODIFICATIONS_USERPARAM :
OpenMS::Constants::UserParam
LOG_CONST :
OpenMS::Constants
- m -
M_PER_FOOT :
OpenMS::Constants
magenta :
OpenMS
MARR_WAVELET_CUTOFF :
OpenMS::Constants
MASS_EPSILON :
OpenMS::Constants
MATCHED_PREFIX_IONS_FRACTION :
OpenMS::Constants::UserParam
MATCHED_SUFFIX_IONS_FRACTION :
OpenMS::Constants::UserParam
MERGED_CHROMATOGRAM_MZS :
OpenMS::Constants::UserParam
MM_PER_INCH :
OpenMS::Constants
MOL :
OpenMS::Constants
MSM_INCHI_STRING :
OpenMS::Constants::UserParam
MSM_METABOLITE_NAME :
OpenMS::Constants::UserParam
MSM_PRECURSOR_ADDUCT :
OpenMS::Constants::UserParam
MSM_SMILES_STRING :
OpenMS::Constants::UserParam
MSM_SUM_FORMULA :
OpenMS::Constants::UserParam
- n -
NA :
OpenMS::Constants
NamesOfDriftTimeUnit :
OpenMS
NamesOfIMFormat :
OpenMS
NEUTRON_MASS :
OpenMS::Constants
NEUTRON_MASS_U :
OpenMS::Constants
newline :
OpenMS::Internal::ClassTest
NUM_OF_DATAPOINTS :
OpenMS::Constants::UserParam
NUM_OF_MASSTRACES :
OpenMS::Constants::UserParam
- o -
ONEOLOG2E :
OpenMS::Constants
OpenMS_ArchNames :
OpenMS::Internal
OpenMS_locale :
OpenMS::Internal
OpenMS_Log_debug :
OpenMS
OpenMS_Log_error :
OpenMS
OpenMS_Log_fatal :
OpenMS
OpenMS_Log_info :
OpenMS
OpenMS_Log_warn :
OpenMS
OpenMS_OSNames :
OpenMS::Internal
OPENPEPXL_BETA_ACCESSIONS :
OpenMS::Constants::UserParam
OPENPEPXL_BETA_PEPEV_END :
OpenMS::Constants::UserParam
OPENPEPXL_BETA_PEPEV_POST :
OpenMS::Constants::UserParam
OPENPEPXL_BETA_PEPEV_PRE :
OpenMS::Constants::UserParam
OPENPEPXL_BETA_PEPEV_START :
OpenMS::Constants::UserParam
OPENPEPXL_BETA_SEQUENCE :
OpenMS::Constants::UserParam
OPENPEPXL_HEAVY_SPEC_MZ :
OpenMS::Constants::UserParam
OPENPEPXL_HEAVY_SPEC_REF :
OpenMS::Constants::UserParam
OPENPEPXL_HEAVY_SPEC_RT :
OpenMS::Constants::UserParam
OPENPEPXL_SCORE :
OpenMS::Constants::UserParam
OPENPEPXL_TARGET_DECOY_ALPHA :
OpenMS::Constants::UserParam
OPENPEPXL_TARGET_DECOY_BETA :
OpenMS::Constants::UserParam
OPENPEPXL_XL_MASS :
OpenMS::Constants::UserParam
OPENPEPXL_XL_MOD :
OpenMS::Constants::UserParam
OPENPEPXL_XL_POS1 :
OpenMS::Constants::UserParam
OPENPEPXL_XL_POS1_PROT :
OpenMS::Constants::UserParam
OPENPEPXL_XL_POS2 :
OpenMS::Constants::UserParam
OPENPEPXL_XL_POS2_PROT :
OpenMS::Constants::UserParam
OPENPEPXL_XL_RANK :
OpenMS::Constants::UserParam
OPENPEPXL_XL_TERM_SPEC_ALPHA :
OpenMS::Constants::UserParam
OPENPEPXL_XL_TERM_SPEC_BETA :
OpenMS::Constants::UserParam
OPENPEPXL_XL_TYPE :
OpenMS::Constants::UserParam
- p -
PEPTIDE_MASS_RULE_BOUND :
OpenMS::Constants
PEPTIDE_MASS_RULE_FACTOR :
OpenMS::Constants
PEPTIDE_MASS_RULE_THEO_PPM_BOUND :
OpenMS::Constants
PI :
OpenMS::Constants
PLANCK :
OpenMS::Constants
POW_CONST :
OpenMS::Constants
PRECURSOR_ERROR_PPM_USERPARAM :
OpenMS::Constants::UserParam
PrecursorMZLess :
OpenMS
PROTON_MASS :
OpenMS::Constants
PROTON_MASS_U :
OpenMS::Constants
PSM_EXPLAINED_ION_CURRENT_USERPARAM :
OpenMS::Constants::UserParam
- r -
R :
OpenMS::Constants
RAD_PER_DEG :
OpenMS::Constants
ratio :
OpenMS::Internal::ClassTest
ratio_max :
OpenMS::Internal::ClassTest
ratio_max_allowed :
OpenMS::Internal::ClassTest
red :
OpenMS
- s -
SHIFT23 :
OpenMS::Constants
SHIFT23_00 :
OpenMS::Constants
SIRIUS_ANNOTATED_ADDUCT :
OpenMS::Constants::UserParam
SIRIUS_ANNOTATED_SUMFORMULA :
OpenMS::Constants::UserParam
SIRIUS_DECOY :
OpenMS::Constants::UserParam
SIRIUS_EXACTMASS :
OpenMS::Constants::UserParam
SIRIUS_EXPLANATION :
OpenMS::Constants::UserParam
SIRIUS_FEATURE_ID :
OpenMS::Constants::UserParam
SIRIUS_MZ :
OpenMS::Constants::UserParam
SIRIUS_PEAKMZ :
OpenMS::Constants::UserParam
SIRIUS_SCORE :
OpenMS::Constants::UserParam
SpectralMatchScoreGreater :
OpenMS
SPECTRUM_REFERENCE :
OpenMS::Constants::UserParam
SPEED_OF_LIGHT :
OpenMS::Constants
start_section_line :
OpenMS::Internal::ClassTest
StatsSourceNames :
OpenMS
STREAM_HANDLER :
OpenMS
supported_types :
OpenMS
- t -
TARGET_DECOY :
OpenMS::Constants::UserParam
templatefile :
OpenMS::Internal::ClassTest
test :
OpenMS::Internal::ClassTest
test_count :
OpenMS::Internal::ClassTest
test_line :
OpenMS::Internal::ClassTest
test_name :
OpenMS::Internal::ClassTest
this_test :
OpenMS::Internal::ClassTest
tmp_file_list :
OpenMS::Internal::ClassTest
- u -
underline :
OpenMS
user_section :
OpenMS
- v -
VACUUM_PERMEABILITY :
OpenMS::Constants
VACUUM_PERMITTIVITY :
OpenMS::Constants
verbose :
OpenMS::Internal::ClassTest
version_string :
OpenMS::Internal::ClassTest
- w -
WAVELET_PERIODICITY :
OpenMS::Constants
- x -
XFDR_FDR :
OpenMS::Constants::UserParam
- y -
yellow :
OpenMS
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