MarkerMower uses PeakMarker to find peaks, those that are not marked get removed. More...

#include <OpenMS/FILTERING/TRANSFORMERS/MarkerMower.h>

Inheritance diagram for MarkerMower:

Collaboration diagram for MarkerMower:

Public Member Functions
	MarkerMower ()
	default constructor More...

	~MarkerMower () override
	destructor More...

	MarkerMower (const MarkerMower &source)
	copy constructor More...

MarkerMower &	operator= (const MarkerMower &source)
	assignment operator More...

template<typename SpectrumType >
void	filterSpectrum (SpectrumType &spectrum)

void	filterPeakSpectrum (PeakSpectrum &spectrum)

void	filterPeakMap (PeakMap &exp)

void	insertmarker (PeakMarker *peak_marker)
	insert new Marker (violates the DefaultParamHandler interface) More...

Public Member Functions inherited from DefaultParamHandler
	DefaultParamHandler (const String &name)
	Constructor with name that is displayed in error messages. More...

	DefaultParamHandler (const DefaultParamHandler &rhs)
	Copy constructor. More...

virtual	~DefaultParamHandler ()
	Destructor. More...

DefaultParamHandler &	operator= (const DefaultParamHandler &rhs)
	Assignment operator. More...

virtual bool	operator== (const DefaultParamHandler &rhs) const
	Equality operator. More...

void	setParameters (const Param &param)
	Sets the parameters. More...

const Param &	getParameters () const
	Non-mutable access to the parameters. More...

const Param &	getDefaults () const
	Non-mutable access to the default parameters. More...

const String &	getName () const
	Non-mutable access to the name. More...

void	setName (const String &name)
	Mutable access to the name. More...

const std::vector< String > &	getSubsections () const
	Non-mutable access to the registered subsections. More...

Static Public Member Functions
static const String	getProductName ()

Static Public Member Functions inherited from DefaultParamHandler
static void	writeParametersToMetaValues (const Param &write_this, MetaInfoInterface &write_here, const String &key_prefix="")
	Writes all parameters to meta values. More...

Private Attributes
std::vector< PeakMarker * >	markers_
	used peak markers More...

Additional Inherited Members
Protected Member Functions inherited from DefaultParamHandler
virtual void	updateMembers_ ()
	This method is used to update extra member variables at the end of the setParameters() method. More...

void	defaultsToParam_ ()
	Updates the parameters after the defaults have been set in the constructor. More...

Protected Attributes inherited from DefaultParamHandler
Param	param_
	Container for current parameters. More...

Param	defaults_
	Container for default parameters. This member should be filled in the constructor of derived classes! More...

std::vector< String >	subsections_
	Container for registered subsections. This member should be filled in the constructor of derived classes! More...

String	error_name_
	Name that is displayed in error messages during the parameter checking. More...

bool	check_defaults_
	If this member is set to false no checking if parameters in done;. More...

bool	warn_empty_defaults_
	If this member is set to false no warning is emitted when defaults are empty;. More...

Detailed Description

MarkerMower uses PeakMarker to find peaks, those that are not marked get removed.

Constructor & Destructor Documentation

◆ MarkerMower() [1/2]

MarkerMower ( )

default constructor

◆ ~MarkerMower()

~MarkerMower ( )

override

destructor

◆ MarkerMower() [2/2]

MarkerMower ( const MarkerMower & source )

copy constructor

Member Function Documentation

◆ filterPeakMap()

void filterPeakMap ( PeakMap & exp )

◆ filterPeakSpectrum()

void filterPeakSpectrum ( PeakSpectrum & spectrum )

◆ filterSpectrum()

void filterSpectrum ( SpectrumType & spectrum )

inline

◆ getProductName()

static const String getProductName ( )

inlinestatic

◆ insertmarker()

void insertmarker ( PeakMarker * peak_marker )

insert new Marker (violates the DefaultParamHandler interface)

◆ operator=()

MarkerMower& operator= ( const MarkerMower & source )

assignment operator

Member Data Documentation

◆ markers_

std::vector<PeakMarker *> markers_

private

used peak markers

Public Member Functions

Static Public Member Functions

Private Attributes

Additional Inherited Members