Statistics for quantitation performance and comparison of NNLS vs. naive method (aka matrix inversion) More...
#include <OpenMS/ANALYSIS/QUANTITATION/IsobaricQuantifierStatistics.h>
Public Member Functions | |
| IsobaricQuantifierStatistics () | |
| Create stats object. More... | |
| void | reset () |
| Reset statistics object. More... | |
| IsobaricQuantifierStatistics (const IsobaricQuantifierStatistics &other) | |
| Copy c'tor. More... | |
| IsobaricQuantifierStatistics & | operator= (const IsobaricQuantifierStatistics &rhs) |
| Assignment operator. More... | |
Public Attributes | |
| Size | channel_count |
| 4plex, 6plex, or 8 plex?! More... | |
| Size | iso_number_ms2_negative |
| number of MS2 spectra where one or more channels had negative solution More... | |
| Size | iso_number_reporter_negative |
| number of channels where naive solution was negative More... | |
| Size | iso_number_reporter_different |
| number of channels >0 where naive solution was different; happens when naive solution is negative in other channels More... | |
| double | iso_solution_different_intensity |
| absolute intensity difference between both solutions (for channels > 0) More... | |
| double | iso_total_intensity_negative |
| only for spectra where naive solution is negative More... | |
| Size | number_ms2_total |
| total number of MS2 spectra More... | |
| Size | number_ms2_empty |
| number of empty MS2 (no reporters at all) More... | |
| std::map< String, Size > | empty_channels |
| Channel_ID -> Missing; indicating the number of empty channels from all MS2 scans, i.e., numbers are between number_ms2_empty and number_ms2_total. More... | |
Statistics for quantitation performance and comparison of NNLS vs. naive method (aka matrix inversion)
Create stats object.
| IsobaricQuantifierStatistics | ( | const IsobaricQuantifierStatistics & | other | ) |
Copy c'tor.
| IsobaricQuantifierStatistics& operator= | ( | const IsobaricQuantifierStatistics & | rhs | ) |
Assignment operator.
| void reset | ( | ) |
Reset statistics object.
| Size channel_count |
4plex, 6plex, or 8 plex?!
Channel_ID -> Missing; indicating the number of empty channels from all MS2 scans, i.e., numbers are between number_ms2_empty and number_ms2_total.
| Size iso_number_ms2_negative |
number of MS2 spectra where one or more channels had negative solution
| Size iso_number_reporter_different |
number of channels >0 where naive solution was different; happens when naive solution is negative in other channels
| Size iso_number_reporter_negative |
number of channels where naive solution was negative
| double iso_solution_different_intensity |
absolute intensity difference between both solutions (for channels > 0)
| double iso_total_intensity_negative |
only for spectra where naive solution is negative
| Size number_ms2_empty |
number of empty MS2 (no reporters at all)
| Size number_ms2_total |
total number of MS2 spectra
1.9.1 
