ProForma::Label Struct Reference

Label for cross-links, branches, or ambiguous grouping. More...

#include <OpenMS/CHEMISTRY/ProForma.h>

Collaboration diagram for ProForma::Label:

Public Types
enum class	Type { CROSSLINK , BRANCH , AMBIGUOUS }
	The type of label. More...

Public Attributes
Type	type
	The label type.
String	identifier
	The label identifier (e.g., XL1, BRANCH, g1)
std::optional< double >	score
	Optional localization score for ambiguous labels (e.g., 0.90)

Detailed Description

Label for cross-links, branches, or ambiguous grouping.

Labels are used to:

• Connect cross-linked sites: [XLMOD:02001#XL1]...[#XL1]
• Mark branch points: [#BRANCH]
• Group ambiguously localized modifications: [Phospho#g1(0.90)]

Member Enumeration Documentation

Type

enum class Type

strong

The type of label.

Enumerator
CROSSLINK	Cross-link label (e.g., #XL1)
BRANCH	Branch point label (#BRANCH)
AMBIGUOUS	Ambiguous localization group (e.g., #g1)

Member Data Documentation

identifier

String identifier

The label identifier (e.g., XL1, BRANCH, g1)

Referenced by OpenMS::from_json(), and OpenMS::to_json().

score

std::optional<double> score

Optional localization score for ambiguous labels (e.g., 0.90)

Referenced by OpenMS::from_json(), and OpenMS::to_json().

type

Type type

The label type.

Referenced by OpenMS::from_json(), and OpenMS::to_json().