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MzTab.h File Reference
#include <OpenMS/FORMAT/SVOutStream.h>
#include <OpenMS/CONCEPT/Exception.h>
#include <map>
#include <vector>
#include <list>
#include <algorithm>
#include <OpenMS/KERNEL/StandardTypes.h>

Go to the source code of this file.

Classes

class  MzTabNullAbleInterface
 
class  MzTabNullNaNAndInfAbleInterface
 
class  MzTabNullAbleBase
 
class  MzTabNullNaNAndInfAbleBase
 
class  MzTabDouble
 
class  MzTabDoubleList
 
class  MzTabInteger
 
class  MzTabIntegerList
 
class  MzTabBoolean
 
class  MzTabString
 
class  MzTabParameter
 
class  MzTabParameterList
 
class  MzTabStringList
 
class  MzTabModification
 
class  MzTabModificationList
 
class  MzTabSpectraRef
 
struct  MzTabSampleMetaData
 
struct  MzTabSoftwareMetaData
 
struct  MzTabModificationMetaData
 
struct  MzTabAssayMetaData
 
struct  MzTabCVMetaData
 
struct  MzTabInstrumentMetaData
 
struct  MzTabContactMetaData
 
struct  MzTabMSRunMetaData
 
struct  MzTabStudyVariableMetaData
 
class  MzTabMetaData
 
struct  MzTabProteinSectionRow
 
struct  MzTabPeptideSectionRow
 
struct  MzTabPSMSectionRow
 
struct  MzTabSmallMoleculeSectionRow
 
class  MzTab
 Data model of MzTab files. Please see the official MzTab specification at https://code.google.com/p/mztab/. More...
 

Namespaces

 OpenMS
 Main OpenMS namespace.
 

Typedefs

typedef std::pair< String, MzTabString > MzTabOptionalColumnEntry
 
typedef std::vector< MzTabProteinSectionRow > MzTabProteinSectionRows
 
typedef std::vector< MzTabPeptideSectionRow > MzTabPeptideSectionRows
 
typedef std::vector< MzTabPSMSectionRow > MzTabPSMSectionRows
 
typedef std::vector< MzTabSmallMoleculeSectionRow > MzTabSmallMoleculeSectionRows
 

Enumerations

enum  MzTabCellStateType {
  MZTAB_CELLSTATE_DEFAULT, MZTAB_CELLSTATE_NULL, MZTAB_CELLSTATE_NAN, MZTAB_CELLSTATE_INF,
  SIZE_OF_MZTAB_CELLTYPE
}
 Data model of MzTab files. Please see the official MzTab specification at https://code.google.com/p/mztab/. More...
 

OpenMS / TOPP release 2.3.0 Documentation generated on Tue Jan 9 2018 18:22:05 using doxygen 1.8.13