SpectrumAccessTransforming.h

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#ifndef OPENMS_ANALYSIS_OPENSWATH_DATAACCESS_SPECTRUMACCESSTRANSFORMING_H
#define OPENMS_ANALYSIS_OPENSWATH_DATAACCESS_SPECTRUMACCESSTRANSFORMING_H

#include <OpenMS/config.h>
#include <OpenMS/ANALYSIS/OPENSWATH/OPENSWATHALGO/DATAACCESS/ISpectrumAccess.h>

namespace OpenMS
{

  class OPENMS_DLLAPI SpectrumAccessTransforming :
    public OpenSwath::ISpectrumAccess
  {
public:

    explicit SpectrumAccessTransforming(OpenSwath::SpectrumAccessPtr sptr);
        
    virtual ~SpectrumAccessTransforming() = 0;

    virtual boost::shared_ptr<ISpectrumAccess> lightClone() const = 0;

    virtual OpenSwath::SpectrumPtr getSpectrumById(int id);

    virtual OpenSwath::SpectrumMeta getSpectrumMetaById(int id) const;

    virtual std::vector<std::size_t> getSpectraByRT(double RT, double deltaRT) const;

    virtual size_t getNrSpectra() const;

    virtual OpenSwath::ChromatogramPtr getChromatogramById(int id);

    virtual size_t getNrChromatograms() const;

    virtual std::string getChromatogramNativeID(int id) const;

protected:
    OpenSwath::SpectrumAccessPtr sptr_;

  };

}

#endif