GridFeature Class Reference

Representation of a feature in a hash grid. More...

#include <OpenMS/DATASTRUCTURES/GridFeature.h>

Public Member Functions
	GridFeature (const BaseFeature &feature, Size map_index, Size feature_index)
	Detailed constructor. More...
const BaseFeature &	getFeature () const
	Returns the feature. More...
virtual	~GridFeature ()
	Destructor. More...
Size	getMapIndex () const
	Returns the map index. More...
Size	getFeatureIndex () const
	Returns the feature index. More...
Int	getID () const
	Returns the ID of the GridFeature (same as the feature index) More...
const std::set< AASequence > &	getAnnotations () const
	Returns the set of peptide sequences annotated to the cluster center. More...
double	getRT () const
	Returns the feature RT. More...
double	getMZ () const
	Returns the feature m/z. More...

Private Attributes
const BaseFeature &	feature_
	Reference to the contained feature. More...
Size	map_index_
	Index of the feature map or consensus map. More...
Size	feature_index_
	Index of the feature in the map. More...
std::set< AASequence >	annotations_
	Set of peptide sequences annotated to the feature. More...

Detailed Description

Representation of a feature in a hash grid.

A GridFeature can be stored in a HashGrid and points to a BaseFeature (Feature or ConsensusFeature). Used for QT feature grouping (see QTClusterFinder).

Constructor & Destructor Documentation

GridFeature()

GridFeature	(	const BaseFeature &	feature,
		Size	map_index,
		Size	feature_index
	)

Detailed constructor.

Parameters

feature	Reference to the contained feature
map_index	Index of the feature map or consensus map
feature_index	Index of the feature in the map

~GridFeature()

virtual ~GridFeature ( )

virtual

Destructor.

Member Function Documentation

getAnnotations()

const std::set<AASequence>& getAnnotations

(

)

const

Returns the set of peptide sequences annotated to the cluster center.

getFeature()

const BaseFeature& getFeature

(

)

const

Returns the feature.

getFeatureIndex()

Size getFeatureIndex

(

)

const

Returns the feature index.

getID()

Int getID

(

)

const

Returns the ID of the GridFeature (same as the feature index)

getMapIndex()

Size getMapIndex

(

)

const

Returns the map index.

getMZ()

double getMZ

(

)

const

Returns the feature m/z.

getRT()

double getRT

(

)

const

Returns the feature RT.

Member Data Documentation

annotations_

std::set<AASequence> annotations_

private

Set of peptide sequences annotated to the feature.

feature_

const BaseFeature& feature_

private

Reference to the contained feature.

feature_index_

Size feature_index_

private

Index of the feature in the map.

map_index_

Size map_index_

private

Index of the feature map or consensus map.