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MRMFeatureOpenMS Class Reference

An implementation of the OpenSWATH MRM Feature Access interface using OpenMS. More...

#include <OpenMS/ANALYSIS/OPENSWATH/DATAACCESS/MRMFeatureAccessOpenMS.h>

Inheritance diagram for MRMFeatureOpenMS:
IMRMFeature

Public Member Functions

 MRMFeatureOpenMS (MRMFeature &mrmfeature)
 
 ~MRMFeatureOpenMS ()
 
boost::shared_ptr< OpenSwath::IFeaturegetFeature (std::string nativeID)
 
boost::shared_ptr< OpenSwath::IFeaturegetPrecursorFeature (std::string nativeID)
 
std::vector< std::string > getNativeIDs () const
 
std::vector< std::string > getPrecursorIDs () const
 
float getIntensity ()
 
double getRT ()
 
size_t size ()
 
- Public Member Functions inherited from IMRMFeature
virtual ~IMRMFeature ()
 

Private Attributes

const MRMFeaturemrmfeature_
 
std::map< std::string, boost::shared_ptr< FeatureOpenMS > > features_
 
std::map< std::string, boost::shared_ptr< FeatureOpenMS > > precursor_features_
 

Detailed Description

An implementation of the OpenSWATH MRM Feature Access interface using OpenMS.

Constructor & Destructor Documentation

◆ MRMFeatureOpenMS()

MRMFeatureOpenMS ( MRMFeature mrmfeature)
explicit

◆ ~MRMFeatureOpenMS()

Member Function Documentation

◆ getFeature()

boost::shared_ptr<OpenSwath::IFeature> getFeature ( std::string  nativeID)
virtual

Implements IMRMFeature.

◆ getIntensity()

float getIntensity ( )
virtual

Implements IMRMFeature.

◆ getNativeIDs()

std::vector<std::string> getNativeIDs ( ) const
virtual

Implements IMRMFeature.

◆ getPrecursorFeature()

boost::shared_ptr<OpenSwath::IFeature> getPrecursorFeature ( std::string  nativeID)
virtual

Implements IMRMFeature.

◆ getPrecursorIDs()

std::vector<std::string> getPrecursorIDs ( ) const
virtual

Implements IMRMFeature.

◆ getRT()

double getRT ( )
virtual

Implements IMRMFeature.

◆ size()

size_t size ( )
virtual

Implements IMRMFeature.

Member Data Documentation

◆ features_

std::map<std::string, boost::shared_ptr<FeatureOpenMS> > features_
private

◆ mrmfeature_

const MRMFeature& mrmfeature_
private

◆ precursor_features_

std::map<std::string, boost::shared_ptr<FeatureOpenMS> > precursor_features_
private

OpenMS / TOPP release 2.3.0 Documentation generated on Tue Jan 9 2018 18:22:10 using doxygen 1.8.13