MarkerMower uses PeakMarker to find peaks, those that are not marked get removed. More...
#include <OpenMS/FILTERING/TRANSFORMERS/MarkerMower.h>
Inheritance diagram for MarkerMower:
Public Member Functions | |
| MarkerMower () | |
| default constructor More... | |
| virtual | ~MarkerMower () |
| destructor More... | |
| MarkerMower (const MarkerMower &source) | |
| copy constructor More... | |
| MarkerMower & | operator= (const MarkerMower &source) |
| assignment operator More... | |
 Public Member Functions inherited from DefaultParamHandler | |
| DefaultParamHandler (const String &name) | |
| Constructor with name that is displayed in error messages. More... | |
| DefaultParamHandler (const DefaultParamHandler &rhs) | |
| Copy constructor. More... | |
| virtual | ~DefaultParamHandler () |
| Destructor. More... | |
| virtual DefaultParamHandler & | operator= (const DefaultParamHandler &rhs) |
| Assignment operator. More... | |
| virtual bool | operator== (const DefaultParamHandler &rhs) const |
| Equality operator. More... | |
| void | setParameters (const Param ¶m) |
| Sets the parameters. More... | |
| const Param & | getParameters () const |
| Non-mutable access to the parameters. More... | |
| const Param & | getDefaults () const |
| Non-mutable access to the default parameters. More... | |
| const String & | getName () const |
| Non-mutable access to the name. More... | |
| void | setName (const String &name) |
| Mutable access to the name. More... | |
| const std::vector< String > & | getSubsections () const |
| Non-mutable access to the registered subsections. More... | |
Private Attributes | |
| std::vector< PeakMarker * > | markers_ |
| used peak markers More... | |
| template<typename SpectrumType > | |
| void | filterSpectrum (SpectrumType &spectrum) |
| void | filterPeakSpectrum (PeakSpectrum &spectrum) |
| void | filterPeakMap (PeakMap &exp) |
| void | insertmarker (PeakMarker *peak_marker) |
| insert new Marker (violates the DefaultParamHandler interface) More... | |
| static const String | getProductName () |
Additional Inherited Members | |
| Protected Member Functions inherited from DefaultParamHandler | |
| virtual void | updateMembers_ () |
| This method is used to update extra member variables at the end of the setParameters() method. More... | |
| void | defaultsToParam_ () |
| Updates the parameters after the defaults have been set in the constructor. More... | |
| Protected Attributes inherited from DefaultParamHandler | |
| Param | param_ |
| Container for current parameters. More... | |
| Param | defaults_ |
| Container for default parameters. This member should be filled in the constructor of derived classes! More... | |
| std::vector< String > | subsections_ |
| Container for registered subsections. This member should be filled in the constructor of derived classes! More... | |
| String | error_name_ |
| Name that is displayed in error messages during the parameter checking. More... | |
| bool | check_defaults_ |
| If this member is set to false no checking if parameters in done;. More... | |
| bool | warn_empty_defaults_ |
| If this member is set to false no warning is emitted when defaults are empty;. More... | |
Detailed Description
MarkerMower uses PeakMarker to find peaks, those that are not marked get removed.
Constructor & Destructor Documentation
◆ MarkerMower() [1/2]
| MarkerMower | ( | ) |
default constructor
◆ ~MarkerMower()
|
virtual |
destructor
◆ MarkerMower() [2/2]
| MarkerMower | ( | const MarkerMower & | source | ) |
copy constructor
Member Function Documentation
◆ filterPeakMap()
| void filterPeakMap | ( | PeakMap & | exp | ) |
◆ filterPeakSpectrum()
| void filterPeakSpectrum | ( | PeakSpectrum & | spectrum | ) |
◆ filterSpectrum()
|
inline |
◆ getProductName()
|
inlinestatic |
◆ insertmarker()
| void insertmarker | ( | PeakMarker * | peak_marker | ) |
insert new Marker (violates the DefaultParamHandler interface)
◆ operator=()
| MarkerMower& operator= | ( | const MarkerMower & | source | ) |
assignment operator
Member Data Documentation
◆ markers_
|
private |
used peak markers