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Interpretation Struct Reference

#include <OpenMS/ANALYSIS/TARGETED/TargetedExperimentHelper.h>

Inheritance diagram for Interpretation:
CVTermListInterface MetaInfoInterface

Public Types

typedef Residue::ResidueType IonType
 

Public Member Functions

 Interpretation ()
 
 Interpretation (const Interpretation &rhs)
 
Operators assignment, equality, inequality
bool operator== (const Interpretation &rhs) const
 
Interpretationoperator= (const Interpretation &rhs)
 
bool operator!= (const Interpretation &rhs) const
 
- Public Member Functions inherited from CVTermListInterface
 CVTermListInterface ()
 
 CVTermListInterface (const CVTermListInterface &rhs)
 
 ~CVTermListInterface ()
 
CVTermListInterfaceoperator= (const CVTermListInterface &rhs)
 Assignment operator. More...
 
bool operator== (const CVTermListInterface &rhs) const
 equality operator More...
 
bool operator!= (const CVTermListInterface &rhs) const
 inequality operator More...
 
void replaceCVTerms (Map< String, std::vector< CVTerm > > &cv_terms)
 
void setCVTerms (const std::vector< CVTerm > &terms)
 sets the CV terms More...
 
void replaceCVTerm (const CVTerm &cv_term)
 replaces the specified CV term More...
 
void replaceCVTerms (const std::vector< CVTerm > &cv_terms, const String &accession)
 replaces the specified CV terms using the given accession number More...
 
void replaceCVTerms (const Map< String, std::vector< CVTerm > > &cv_term_map)
 replaces all cv terms with a map (can be obtained via getCVTerms) More...
 
void consumeCVTerms (const Map< String, std::vector< CVTerm > > &cv_term_map)
 merges the given map into the member map, no duplicate checking More...
 
const Map< String, std::vector< CVTerm > > & getCVTerms () const
 returns the accession string of the term More...
 
void addCVTerm (const CVTerm &term)
 adds a CV term More...
 
bool hasCVTerm (const String &accession) const
 checks whether the term has a value More...
 
bool empty () const
 
- Public Member Functions inherited from MetaInfoInterface
 MetaInfoInterface ()
 Constructor. More...
 
 MetaInfoInterface (const MetaInfoInterface &rhs)
 Copy constructor. More...
 
 ~MetaInfoInterface ()
 Destructor. More...
 
MetaInfoInterfaceoperator= (const MetaInfoInterface &rhs)
 Assignment operator. More...
 
bool operator== (const MetaInfoInterface &rhs) const
 Equality operator. More...
 
bool operator!= (const MetaInfoInterface &rhs) const
 Equality operator. More...
 
const DataValuegetMetaValue (const String &name) const
 Returns the value corresponding to a string (or DataValue::EMPTY if not found) More...
 
const DataValuegetMetaValue (UInt index) const
 Returns the value corresponding to an index (or DataValue::EMPTY if not found) More...
 
bool metaValueExists (const String &name) const
 Returns whether an entry with the given name exists. More...
 
bool metaValueExists (UInt index) const
 Returns whether an entry with the given index exists. More...
 
void setMetaValue (const String &name, const DataValue &value)
 Sets the DataValue corresponding to a name. More...
 
void setMetaValue (UInt index, const DataValue &value)
 Sets the DataValue corresponding to an index. More...
 
void removeMetaValue (const String &name)
 Removes the DataValue corresponding to name if it exists. More...
 
void removeMetaValue (UInt index)
 Removes the DataValue corresponding to index if it exists. More...
 
void getKeys (std::vector< String > &keys) const
 Fills the given vector with a list of all keys for which a value is set. More...
 
void getKeys (std::vector< UInt > &keys) const
 Fills the given vector with a list of all keys for which a value is set. More...
 
bool isMetaEmpty () const
 Returns if the MetaInfo is empty. More...
 
void clearMetaInfo ()
 Removes all meta values. More...
 

Public Attributes

unsigned char ordinal
 
unsigned char rank
 
IonType iontype
 

Additional Inherited Members

- Static Public Member Functions inherited from MetaInfoInterface
static MetaInfoRegistrymetaRegistry ()
 Returns a reference to the MetaInfoRegistry. More...
 
- Protected Member Functions inherited from MetaInfoInterface
void createIfNotExists_ ()
 Creates the MetaInfo object if it does not exist. More...
 
- Protected Attributes inherited from MetaInfoInterface
MetaInfometa_
 Pointer to the MetaInfo object (0 by default) More...
 

Member Typedef Documentation

◆ IonType

Constructor & Destructor Documentation

◆ Interpretation() [1/2]

Interpretation ( )
inline

◆ Interpretation() [2/2]

Interpretation ( const Interpretation rhs)
inline

Member Function Documentation

◆ operator!=()

bool operator!= ( const Interpretation rhs) const
inline

◆ operator=()

Interpretation& operator= ( const Interpretation rhs)
inline

◆ operator==()

bool operator== ( const Interpretation rhs) const
inline

Member Data Documentation

◆ iontype

IonType iontype

◆ ordinal

unsigned char ordinal

◆ rank

unsigned char rank

OpenMS / TOPP release 2.3.0 Documentation generated on Tue Jan 9 2018 18:22:15 using doxygen 1.8.13