OpenMS  2.4.0
Classes | Static Public Member Functions | List of all members
CsiFingerIdMzTabWriter Class Reference

#include <OpenMS/FORMAT/DATAACCESS/CsiFingerIdMzTabWriter.h>

Classes

struct  CsiAdapterHit
 Internal structure used in SiriusAdapter that is used for the conversion of the Csi:FingerID output to an mzTab. More...
 
struct  CsiAdapterIdentification
 
struct  CsiAdapterRun
 

Static Public Member Functions

static void read (const std::vector< String > &sirius_output_paths, const String &original_input_mzml, const Size &top_n_hits, MzTab &result)
 Conversion of CSI:FingerID output to mzTab. More...
 

Member Function Documentation

◆ read()

static void read ( const std::vector< String > &  sirius_output_paths,
const String original_input_mzml,
const Size top_n_hits,
MzTab result 
)
static

Conversion of CSI:FingerID output to mzTab.

Output of CSI:FingerID is one directory per spectrum/compound

Parameters
sirius_output_pathsPath to output directories of Sirius
original_input_mzmlPath to original input mzml of SiriusAdapter
top_n_hitsTop n entries for each compound written to the result file
Returns
Result written to mzTab