OpenMS
2.4.0
|
Kernel datastructures. More...
Modules | |
ComparatorUtils | |
A collection of utilities for comparators. | |
RangeUtils | |
Predicates for range operations. | |
Classes | |
class | BaseFeature |
A basic LC-MS feature. More... | |
class | ChromatogramPeak |
A 1-dimensional raw data point or peak for chromatograms. More... | |
class | ChromatogramTools |
Conversion class to convert chromatograms. More... | |
class | ConsensusFeature |
A consensus feature spanning multiple LC-MS/MS experiments. More... | |
class | ConsensusMap |
A container for consensus elements. More... | |
class | Feature |
An LC-MS feature. More... | |
class | FeatureHandle |
Representation of a Peak2D, RichPeak2D or Feature . More... | |
class | FeatureMap |
A container for features. More... | |
class | MassTrace |
A container type that gathers peaks similar in m/z and moving along retention time. More... | |
class | MSChromatogram |
The representation of a chromatogram. More... | |
class | MSExperiment |
In-Memory representation of a mass spectrometry experiment. More... | |
class | MSSpectrum |
The representation of a 1D spectrum. More... | |
class | OnDiscMSExperiment |
Representation of a mass spectrometry experiment on disk. More... | |
class | Peak1D |
A 1-dimensional raw data point or peak. More... | |
class | Peak2D |
A 2-dimensional raw data point or peak. More... | |
class | RichPeak2D |
A 2-dimensional raw data point or peak with meta information. More... | |
Functions | |
template<class DataArrayT > | |
DataArrayT::iterator | getDataArrayByName (DataArrayT &a, const String &name) |
Helper functions for MSSpectrum and MSChromatogram. More... | |
typedef MSSpectrum | PeakSpectrum |
Spectrum consisting of raw data points or peaks. More... | |
typedef MSExperiment | PeakMap |
Two-dimensional map of raw data points or peaks. More... | |
typedef MSChromatogram | Chromatogram |
Chromatogram consisting of raw data points or peaks. More... | |
Kernel datastructures.
typedef MSChromatogram Chromatogram |
Chromatogram consisting of raw data points or peaks.
typedef MSExperiment PeakMap |
Two-dimensional map of raw data points or peaks.
typedef MSSpectrum PeakSpectrum |
Spectrum consisting of raw data points or peaks.
Meta information includes retention time and MS-level.
DataArrayT::iterator OpenMS::getDataArrayByName | ( | DataArrayT & | a, |
const String & | name | ||
) |
Helper functions for MSSpectrum and MSChromatogram.
Returns an iterator to the first data array with the given name. The end iterator is returned in case no data array with given name exists.
Referenced by TOPPOpenPepXLLF::main_(), TOPPOpenPepXL::main_(), and TOPPOpenPepXL::preprocessPairs_().