#include <OpenMS/ANALYSIS/OPENSWATH/MRMFeatureSelector.h>
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| MRMFeatureSelector_test ()=default |
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| ~MRMFeatureSelector_test ()=default |
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void | constructTargTransList_ (const FeatureMap &features, std::vector< std::pair< double, String >> &time_to_name, std::map< String, std::vector< Feature >> &feature_name_map, const bool select_transition_group) const |
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double | weightScore_ (const double score, const LambdaScore lambda_score) const |
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double | computeScore_ (const Feature &feature, const std::map< String, LambdaScore > &score_weights) const |
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String | removeSpaces_ (String str) const |
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void | optimize (const std::vector< std::pair< double, String >> &time_to_name, const std::map< String, std::vector< Feature >> &feature_name_map, std::vector< String > &result, const SelectorParameters ¶meters) const override |
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| MRMFeatureSelector ()=default |
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virtual | ~MRMFeatureSelector ()=default |
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void | selectMRMFeature (const FeatureMap &features, FeatureMap &selected_filtered, const SelectorParameters ¶meters) const |
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enum | VariableType { INTEGER = 1,
CONTINUOUS
} |
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enum | LambdaScore {
LINEAR = 1,
INVERSE,
LOG,
INVERSE_LOG,
INVERSE_LOG10
} |
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Int | addVariable_ (LPWrapper &problem, const String &name, const bool bounded, const double obj, const VariableType variableType) const |
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double | computeScore_ (const Feature &feature, const std::map< String, LambdaScore > &score_weights) const |
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void | addConstraint_ (LPWrapper &problem, std::vector< Int > indices, std::vector< double > values, const String &name, const double lb, const double ub, const LPWrapper::Type param) const |
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◆ MRMFeatureSelector_test()
◆ ~MRMFeatureSelector_test()
◆ computeScore_()
◆ constructTargTransList_()
void constructTargTransList_ |
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const FeatureMap & |
features, |
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std::vector< std::pair< double, String >> & |
time_to_name, |
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std::map< String, std::vector< Feature >> & |
feature_name_map, |
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const bool |
select_transition_group |
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) |
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inline |
◆ removeSpaces_()
◆ weightScore_()
◆ selector_