WeightWrapper Class Reference

Encapsulated weight queries to simplify mono vs average weight computation. More...

#include <OpenMS/CHEMISTRY/WeightWrapper.h>

Collaboration diagram for WeightWrapper:

Public Types
enum	WEIGHTMODE { AVERAGE = 0, MONO, SIZE_OF_WEIGHTMODE }

Public Member Functions
	WeightWrapper ()
	constructor More...
	WeightWrapper (const WEIGHTMODE weight_mode)
	constructor More...
virtual	~WeightWrapper ()
	destructor More...
	WeightWrapper (const WeightWrapper &source)
	copy constructor More...
void	setWeightMode (const WEIGHTMODE mode)
	Sets the weight mode (MONO or AVERAGE) More...
WEIGHTMODE	getWeightMode () const
	Gets the weight mode (MONO or AVERAGE) More...
double	getWeight (const AASequence &aa) const
	returns the weight of either mono or average value More...
double	getWeight (const EmpiricalFormula &ef) const
	returns the weight of either mono or average value More...
double	getWeight (const Residue &r, Residue::ResidueType res_type=Residue::Full) const
	returns the weight of either mono or average value More...

Private Attributes
WEIGHTMODE	weight_mode_
	one of WeightWrapper::WEIGHTMODE's values More...

Detailed Description

Encapsulated weight queries to simplify mono vs average weight computation.

Supports EmpiricalFormula's and AASequence's getMonoWeight() and getAverageWeight()

Member Enumeration Documentation

WEIGHTMODE

enum WEIGHTMODE

Enumerator
AVERAGE
MONO
SIZE_OF_WEIGHTMODE

Constructor & Destructor Documentation

WeightWrapper() [1/3]

WeightWrapper

(

)

constructor

WeightWrapper() [2/3]

WeightWrapper ( const WEIGHTMODE  weight_mode )

explicit

constructor

~WeightWrapper()

virtual ~WeightWrapper ( )

virtual

destructor

WeightWrapper() [3/3]

WeightWrapper

(

const WeightWrapper &

source

)

copy constructor

Member Function Documentation

getWeight() [1/3]

double getWeight

(

const AASequence &

aa

)

const

returns the weight of either mono or average value

Which weight is returned depends on the current weight-mode.

Returns

double weight in u

getWeight() [2/3]

double getWeight

(

const EmpiricalFormula &

ef

)

const

returns the weight of either mono or average value

Which weight is returned depends on the current weight-mode.

Returns

double weight in u

getWeight() [3/3]

double getWeight	(	const Residue &	r,
		Residue::ResidueType	res_type = Residue::Full
	)		const

returns the weight of either mono or average value

Which weight is returned depends on the current weight-mode.

Returns

double weight in u

getWeightMode()

WEIGHTMODE getWeightMode

(

)

const

Gets the weight mode (MONO or AVERAGE)

Gets the mode in which getWeight() calls are answered.

setWeightMode()

void setWeightMode

(

const WEIGHTMODE

mode

)

Sets the weight mode (MONO or AVERAGE)

Sets the mode in which getWeight() calls are answered.

Member Data Documentation

weight_mode_

WEIGHTMODE weight_mode_

private

one of WeightWrapper::WEIGHTMODE's values