OpenMS
2.6.0
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Public Member Functions | |
AminoAcidModification ()=delete | |
AminoAcidModification (const String &aminoacid, const String &massdiff, const String &mass, String variable, const String &description, String terminus, const String &protein_terminus) | |
AminoAcidModification (const AminoAcidModification &rhs)=default | |
virtual | ~AminoAcidModification ()=default |
AminoAcidModification & | operator= (const AminoAcidModification &rhs)=default |
String | toUnimodLikeString () const |
const String & | getDescription () const |
bool | isVariable () const |
const ResidueModification * | getRegisteredMod () const |
double | getMassDiff () const |
double | getMass () const |
const String & | getTerminus () const |
const String & | getAminoAcid () const |
const std::vector< String > & | getErrors () const |
Private Attributes | |
String | aminoacid_ |
double | massdiff_ |
double | mass_ |
bool | is_variable_ |
String | description_ |
String | terminus_ |
bool | is_protein_terminus_ |
ResidueModification::TermSpecificity | term_spec_ |
std::vector< String > | errors_ |
const ResidueModification * | registered_mod_ |
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delete |
AminoAcidModification | ( | const String & | aminoacid, |
const String & | massdiff, | ||
const String & | mass, | ||
String | variable, | ||
const String & | description, | ||
String | terminus, | ||
const String & | protein_terminus | ||
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Creates an AminoAcidModification object from the pepXML attributes in EITHER aminoacid_modification elements OR terminal_modification elements since we use them ambiguously
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const String& getAminoAcid | ( | ) | const |
const String& getDescription | ( | ) | const |
const std::vector<String>& getErrors | ( | ) | const |
double getMass | ( | ) | const |
double getMassDiff | ( | ) | const |
const ResidueModification* getRegisteredMod | ( | ) | const |
const String& getTerminus | ( | ) | const |
bool isVariable | ( | ) | const |
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String toUnimodLikeString | ( | ) | const |
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