OpenMS
2.6.0
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#include <OpenMS/OPENSWATHALGO/DATAACCESS/TransitionExperiment.h>
Public Types | |
typedef LightTransition | Transition |
typedef LightCompound | Peptide |
typedef LightCompound | Compound |
typedef LightProtein | Protein |
Public Member Functions | |
LightTargetedExperiment () | |
std::vector< LightTransition > & | getTransitions () |
const std::vector< LightTransition > & | getTransitions () const |
std::vector< LightCompound > & | getCompounds () |
const std::vector< LightCompound > & | getCompounds () const |
std::vector< LightProtein > & | getProteins () |
const std::vector< LightProtein > & | getProteins () const |
const LightCompound & | getPeptideByRef (const std::string &ref) |
const LightCompound & | getCompoundByRef (const std::string &ref) |
Public Attributes | |
std::vector< LightTransition > | transitions |
std::vector< LightCompound > | compounds |
std::vector< LightProtein > | proteins |
Private Member Functions | |
void | createPeptideReferenceMap_ () |
Private Attributes | |
bool | compound_reference_map_dirty_ |
std::map< std::string, LightCompound * > | compound_reference_map_ |
typedef LightCompound Compound |
typedef LightCompound Peptide |
typedef LightProtein Protein |
typedef LightTransition Transition |
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References LightTargetedExperiment::compound_reference_map_, LightTargetedExperiment::compound_reference_map_dirty_, and LightTargetedExperiment::createPeptideReferenceMap_().
Referenced by OpenMS::ChromatogramExtractor::extract_id_< OpenSwath::LightTargetedExperiment >(), and LightTargetedExperiment::getPeptideByRef().
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References LightTargetedExperiment::compounds.
Referenced by LightTargetedExperiment::createPeptideReferenceMap_().
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References LightTargetedExperiment::compounds.
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References LightTargetedExperiment::getCompoundByRef().
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References LightTargetedExperiment::proteins.
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References LightTargetedExperiment::proteins.
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References LightTargetedExperiment::transitions.
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References LightTargetedExperiment::transitions.
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std::vector<LightCompound> compounds |
Referenced by LightTargetedExperiment::getCompounds().
std::vector<LightProtein> proteins |
Referenced by LightTargetedExperiment::getProteins().
std::vector<LightTransition> transitions |
Referenced by LightTargetedExperiment::getTransitions(), and TOPPOpenSwathBase::prepareChromOutput().