ProFormaDataJson.h File Reference

#include <OpenMS/CHEMISTRY/ProForma.h>
#include <nlohmann/json.hpp>

Include dependency graph for ProFormaDataJson.h:

Go to the source code of this file.

Namespaces
namespace	OpenMS
	Main OpenMS namespace.

Functions
CvDatabase enum JSON serialization
void	to_json (nlohmann::json &j, const ProForma::CvDatabase &db)
	Convert CvDatabase enum to JSON string.
void	from_json (const nlohmann::json &j, ProForma::CvDatabase &db)
	Construct CvDatabase enum from JSON string.
CvAccession JSON serialization
void	to_json (nlohmann::json &j, const ProForma::CvAccession &cv)
	Convert CvAccession to JSON object.
void	from_json (const nlohmann::json &j, ProForma::CvAccession &cv)
	Construct CvAccession from JSON object.
NamedMod JSON serialization
void	to_json (nlohmann::json &j, const ProForma::NamedMod &nm)
	Convert NamedMod to JSON object.
void	from_json (const nlohmann::json &j, ProForma::NamedMod &nm)
	Construct NamedMod from JSON object.
ProForma::MassDelta::Source enum JSON serialization
void	to_json (nlohmann::json &j, const ProForma::MassDelta::Source &src)
	Convert ProForma::MassDelta::Source enum to JSON string.
void	from_json (const nlohmann::json &j, ProForma::MassDelta::Source &src)
	Construct ProForma::MassDelta::Source enum from JSON string.
MassDelta JSON serialization
void	to_json (nlohmann::json &j, const ProForma::MassDelta &md)
	Convert MassDelta to JSON object.
void	from_json (const nlohmann::json &j, ProForma::MassDelta &md)
	Construct MassDelta from JSON object.
FormulaTag JSON serialization
void	to_json (nlohmann::json &j, const ProForma::FormulaTag &ft)
	Convert FormulaTag to JSON object.
void	from_json (const nlohmann::json &j, ProForma::FormulaTag &ft)
	Construct FormulaTag from JSON object.
ProForma::GlycanComposition::Monosaccharide JSON serialization
void	to_json (nlohmann::json &j, const ProForma::GlycanComposition::Monosaccharide &mono)
	Convert Monosaccharide variant to JSON object.
void	from_json (const nlohmann::json &j, ProForma::GlycanComposition::Monosaccharide &mono)
	Construct Monosaccharide variant from JSON object.
GlycanComposition JSON serialization
void	to_json (nlohmann::json &j, const ProForma::GlycanComposition &gc)
	Convert GlycanComposition to JSON object.
void	from_json (const nlohmann::json &j, ProForma::GlycanComposition &gc)
	Construct GlycanComposition from JSON object.
InfoTag JSON serialization
void	to_json (nlohmann::json &j, const ProForma::InfoTag &it)
	Convert InfoTag to JSON object.
void	from_json (const nlohmann::json &j, ProForma::InfoTag &it)
	Construct InfoTag from JSON object.
PositionConstraint JSON serialization
void	to_json (nlohmann::json &j, const ProForma::PositionConstraint &pc)
	Convert PositionConstraint to JSON object.
void	from_json (const nlohmann::json &j, ProForma::PositionConstraint &pc)
	Construct PositionConstraint from JSON object.
ModificationTag variant JSON serialization
void	to_json (nlohmann::json &j, const ProForma::ModificationTag &tag)
	Convert ModificationTag variant to JSON object.
void	from_json (const nlohmann::json &j, ProForma::ModificationTag &tag)
	Construct ModificationTag variant from JSON object.
ProForma::Label::Type enum JSON serialization
void	to_json (nlohmann::json &j, const ProForma::Label::Type &lt)
	Convert ProForma::Label::Type enum to JSON string.
void	from_json (const nlohmann::json &j, ProForma::Label::Type &lt)
	Construct ProForma::Label::Type enum from JSON string.
Label JSON serialization
void	to_json (nlohmann::json &j, const ProForma::Label &lbl)
	Convert Label to JSON object.
void	from_json (const nlohmann::json &j, ProForma::Label &lbl)
	Construct Label from JSON object.
Modification JSON serialization
void	to_json (nlohmann::json &j, const ProForma::Modification &mod)
	Convert Modification to JSON object.
void	from_json (const nlohmann::json &j, ProForma::Modification &mod)
	Construct Modification from JSON object.
SequenceElement JSON serialization
void	to_json (nlohmann::json &j, const ProForma::SequenceElement &se)
	Convert SequenceElement to JSON object.
void	from_json (const nlohmann::json &j, ProForma::SequenceElement &se)
	Construct SequenceElement from JSON object.
AmbiguousRegion JSON serialization
void	to_json (nlohmann::json &j, const ProForma::AmbiguousRegion &ar)
	Convert AmbiguousRegion to JSON object.
void	from_json (const nlohmann::json &j, ProForma::AmbiguousRegion &ar)
	Construct AmbiguousRegion from JSON object.
ModifiedRange JSON serialization
void	to_json (nlohmann::json &j, const ProForma::ModifiedRange &mr)
	Convert ModifiedRange to JSON object.
void	from_json (const nlohmann::json &j, ProForma::ModifiedRange &mr)
	Construct ModifiedRange from JSON object.
SequenceSection variant JSON serialization
void	to_json (nlohmann::json &j, const ProForma::SequenceSection &ss)
	Convert SequenceSection variant to JSON object.
void	from_json (const nlohmann::json &j, ProForma::SequenceSection &ss)
	Construct SequenceSection variant from JSON object.
UnlocalisedMod JSON serialization
void	to_json (nlohmann::json &j, const ProForma::UnlocalisedMod &um)
	Convert UnlocalisedMod to JSON object.
void	from_json (const nlohmann::json &j, ProForma::UnlocalisedMod &um)
	Construct UnlocalisedMod from JSON object.
LabileModification JSON serialization
void	to_json (nlohmann::json &j, const ProForma::LabileModification &lm)
	Convert LabileModification to JSON object.
void	from_json (const nlohmann::json &j, ProForma::LabileModification &lm)
	Construct LabileModification from JSON object.
GlobalModification JSON serialization
void	to_json (nlohmann::json &j, const ProForma::GlobalModification &gm)
	Convert GlobalModification to JSON object.
void	from_json (const nlohmann::json &j, ProForma::GlobalModification &gm)
	Construct GlobalModification from JSON object.
IsotopeReplacement JSON serialization
void	to_json (nlohmann::json &j, const ProForma::IsotopeReplacement &ir)
	Convert IsotopeReplacement to JSON object.
void	from_json (const nlohmann::json &j, ProForma::IsotopeReplacement &ir)
	Construct IsotopeReplacement from JSON object.
GlobalModEntry variant JSON serialization
void	to_json (nlohmann::json &j, const ProForma::GlobalModEntry &gme)
	Convert GlobalModEntry variant to JSON object.
void	from_json (const nlohmann::json &j, ProForma::GlobalModEntry &gme)
	Construct GlobalModEntry variant from JSON object.
AdductIon JSON serialization
void	to_json (nlohmann::json &j, const ProForma::AdductIon &ai)
	Convert AdductIon to JSON object.
void	from_json (const nlohmann::json &j, ProForma::AdductIon &ai)
	Construct AdductIon from JSON object.
ChargeState variant JSON serialization
void	to_json (nlohmann::json &j, const ProForma::ChargeState &cs)
	Convert ChargeState variant to JSON object.
void	from_json (const nlohmann::json &j, ProForma::ChargeState &cs)
	Construct ChargeState variant from JSON object.
Peptidoform JSON serialization
void	to_json (nlohmann::json &j, const ProForma::Peptidoform &pf)
	Convert Peptidoform to JSON object.
void	from_json (const nlohmann::json &j, ProForma::Peptidoform &pf)
	Construct Peptidoform from JSON object.
PeptidoformIon JSON serialization
void	to_json (nlohmann::json &j, const ProForma::PeptidoformIon &pfi)
	Convert PeptidoformIon to JSON object.
void	from_json (const nlohmann::json &j, ProForma::PeptidoformIon &pfi)
	Construct PeptidoformIon from JSON object.
CrossLinkGroup JSON serialization
void	to_json (nlohmann::json &j, const ProForma::CrossLinkGroup &clg)
	Convert CrossLinkGroup to JSON object.
void	from_json (const nlohmann::json &j, ProForma::CrossLinkGroup &clg)
	Construct CrossLinkGroup from JSON object.