MSNumpressCoder::NumpressConfig Struct Reference

Configuration class for MSNumpress. More...

#include <OpenMS/FORMAT/MSNumpressCoder.h>

Public Member Functions
	NumpressConfig ()
	desired mass accuracy for linear encoding (-1 no effect, use 0.0001 for 0.2 ppm accuracy @ 500 m/z) More...
void	setCompression (const std::string &compression)
	set compression using a string mapping to enum NumpressCompression. More...

Public Attributes
double	numpressFixedPoint
double	numpressErrorTolerance
	fixed point for numpress algorithms More...
NumpressCompression	np_compression
	check error tolerance after encoding, guarantee abs(1.0-(encoded/decoded)) <= this, 0=do not guarantee anything More...
bool	estimate_fixed_point
	which compression schema to use More...
double	linear_fp_mass_acc
	whether to estimate the fixed point or use the one proved with numpressFixedPoint More...

Detailed Description

Configuration class for MSNumpress.

Contains configuration options for ms numpress

Constructor & Destructor Documentation

NumpressConfig()

NumpressConfig ( )

inline

desired mass accuracy for linear encoding (-1 no effect, use 0.0001 for 0.2 ppm accuracy @ 500 m/z)

Member Function Documentation

setCompression()

void setCompression ( const std::string &  compression )

inline

set compression using a string mapping to enum NumpressCompression.

Parameters

compression

A string from NamesOfNumpressCompression[]

Exceptions

Exception::InvalidParameter

if compression is unknown.

Referenced by extractCachedMetaFilename(), and SortPairDoubleByFirst().

Member Data Documentation

estimate_fixed_point

bool estimate_fixed_point

which compression schema to use

Referenced by extractCachedMetaFilename(), and SortPairDoubleByFirst().

linear_fp_mass_acc

double linear_fp_mass_acc

whether to estimate the fixed point or use the one proved with numpressFixedPoint

Referenced by extractCachedMetaFilename(), and SortPairDoubleByFirst().

np_compression

NumpressCompression np_compression

check error tolerance after encoding, guarantee abs(1.0-(encoded/decoded)) <= this, 0=do not guarantee anything

numpressErrorTolerance

double numpressErrorTolerance

fixed point for numpress algorithms

Referenced by extractCachedMetaFilename(), and SortPairDoubleByFirst().

numpressFixedPoint

double numpressFixedPoint