Here is a list of all class members with links to the classes they belong to:
- t -
- t
: RANSACParam
- t_star_
: LinearRegression
- tab_bar_
: TOPPASBase
, TOPPViewBase
- TAB_SIZE
: ScoringMatrixData_< int, AminoAcid, AdaptedIdentity >
, ScoringMatrixData_< int, AminoAcid, PAM30MS >
- tab_width_
: FuzzyStringComparator
- tabAt_()
: EnhancedTabBar
, TOPPASTabBar
- table_steps_
: IsotopeWavelet
- table_widget_
: SpectraIdentificationViewWidget
- tableExists()
: SqliteConnector
- tableRows
: QcMLFile::Attachment
- tag()
: DocumentIDTagger
- tag_
: CVMappingFile
, MascotXMLHandler
, MzIdentMLHandler
, MzQuantMLHandler
, PTMXMLHandler
, ToolDescriptionHandler
, TraMLHandler
, UnimodXMLHandler
, OMSSAXMLFile
, QcMLFile
, XTandemXMLFile
- tag_count_
: InspectInfile
- tag_peaks_with_spectrum_ID()
: LCMS
- Tagger()
: Tagger
- Tagging()
: Tagging
- taggingmass_shift_
: TaggingVisualizer
- taggingvariant_
: TaggingVisualizer
- TaggingVisualizer()
: TaggingVisualizer
- tags
: Param::ParamEntry
, ParameterInformation
- tags_open_
: MascotXMLHandler
- tailing_factor
: PeakIntegrator::PeakShapeMetrics
- TAlphabet
: Pattern< TNeedle, FuzzyAC >
, PatternAuxData< TNeedle >
, Spawn< TNeedle >
- target
: FileMapping
, LogStreamBuf::StreamStruct
- TARGET
: ReactionMonitoringTransition
- target_
: ListUtils::DoubleTolerancePredicate_
- target_in_param_
: TOPPASEdge
- target_input_param_indices_
: TOPPASIOMappingDialog
- target_intensity
: PrecursorPurity::PurityScores
- target_peak_count
: PrecursorPurity::PurityScores
- TargetDecoyMapT
: MRMAssay
- TargetedExperiment()
: TargetedExperiment
- TargetedExpType
: MRMFeatureFinderScoring
- targetedMatching()
: TargetedSpectraExtractor
- TargetedSpectraExtractor()
: TargetedSpectraExtractor
- targetMzXML
: FTPeakDetectController
- targets_
: TargetedExperiment
- tau_
: EGHFitter1D
, EGHModel
, EGHTraceFitter
- taxid
: MzTabNucleicAcidSectionRow
, MzTabProteinSectionRow
, MzTabSmallMoleculeSectionRow
- taxon_
: XTandemInfile
- taxonomy
: DBSearchParam
, ProteinIdentification::SearchParameters
- taxonomy_
: MascotInfile
, ProteinIdentificationVisualizer
- taxonomy_file_
: XTandemInfile
- td_
: AcqusHandler
, ToolDescriptionHandler
- td_vec_
: ToolDescriptionHandler
- TDC
: IonDetector
- tde_
: ToolDescriptionHandler
- TDF
: InstrumentSettings
- technical_rng_
: SimRandomNumberGenerator
- techrepmixture_
: MSstatsFile::MSstatsTMTLine_
- temp_
: BaseVisualizer< ObjectType >
- temperature_
: Digestion
, HPLC
- temporary_annotations_
: TOPPViewIdentificationViewBehavior
- temporary_files_
: File
- TemporaryFiles_()
: File::TemporaryFiles_
- TENPERCENTVALLEY
: MassAnalyzer
- term_name_
: CVMappingTerm
- term_spec_
: ResidueModification
, Ribonucleotide
- term_spec_alpha
: OPXLDataStructs::ProteinProteinCrossLink
- term_spec_beta
: OPXLDataStructs::ProteinProteinCrossLink
- term_specs_
: UnimodXMLHandler
- terminal_series_match_ratio_
: SpectrumAnnotator
- terminate()
: GlobalExceptionHandler
- terminateCurrentPipeline()
: TOPPASScene
- terminus
: PepXMLFile::AminoAcidModification
- terms_
: ControlledVocabulary
- TermSpecificity
: ResidueModification
- TermSpecificityNuc
: Ribonucleotide
- test_mode_
: TOPPBase
- TestTOPPView
: TOPPViewBase
- TEXT
: ParameterInformation
- text_
: Annotation1DItem
- text_box_content_
: Spectrum1DCanvas
- text_fail
: ToolExternalDetails
- text_finish
: ToolExternalDetails
- text_startup
: ToolExternalDetails
- TextFile()
: TextFile
- TGraph
: Pattern< TNeedle, FuzzyAC >
, PatternAuxData< TNeedle >
, Spawn< TNeedle >
- tgt_begin_
: MatchedIterator< CONT_T, TRAIT, CONST_T >
- tgt_end_
: MatchedIterator< CONT_T, TRAIT, CONST_T >
- tgtIdx()
: MatchedIterator< CONT_T, TRAIT, CONST_T >
- th_
: BernNorm
- THEO_MZ
: MS2Info
- theoretical_int
: FeatureFinderAlgorithmPickedHelperStructs::MassTrace
- theoretical_mass
: Compound
- theoretical_mz
: FeatureFinderAlgorithmPickedHelperStructs::IsotopePattern
- theoretical_mz_
: AccurateMassSearchResult
- theoretical_pattern
: FeatureFinderAlgorithmPickedHelperStructs::IsotopePattern
- TheoreticalIsotopePattern
: FeatureFinderAlgorithmPicked
, IsotopeDistributionCache
- TheoreticalSpectrumGenerationDialog()
: TheoreticalSpectrumGenerationDialog
- TheoreticalSpectrumGenerator()
: TheoreticalSpectrumGenerator
- TheoreticalSpectrumGeneratorXLMS()
: TheoreticalSpectrumGeneratorXLMS
- THERMOSPRAYINLET
: IonSource
- THREADED_RANDOM_NUMBER_POOL_SIZE_
: RawMSSignalSimulation
- threaded_random_numbers_
: RawMSSignalSimulation
- threaded_random_numbers_index_
: RawMSSignalSimulation
- threads_active_
: TOPPASScene
- threads_outer_loop_
: OpenSwathWorkflowBase
- three_letter_code_
: Residue
- THREE_PRIME
: Ribonucleotide
- three_prime_
: NASequence
- three_prime_gain_
: DigestionEnzymeRNA
, RNaseDigestion
- ThreePrime
: NASequence
- thresh_p_
: MassExplainer
- threshold_
: ClusterHierarchical
, MapAlignmentAlgorithmSpectrumAlignment
, ThresholdMower
- threshold_cvs
: MzIdentMLDOMHandler::SpectrumIdentificationProtocol
- threshold_ups
: MzIdentMLDOMHandler::SpectrumIdentificationProtocol
- ThresholdMower()
: ThresholdMower
- TI
: IonSource
- TIC
: MorpheusScore::Result
, TIC
- tic_weight_
: TargetedSpectraExtractor
- TICFilter()
: TICFilter
- tick_level_
: AxisWidget
- ticks_
: Annotation1DDistanceItem
- tie()
: PeptideIndexing::PeptideProteinMatchInformation
- tileHorizontal()
: TOPPViewBase
- tileVertical()
: TOPPViewBase
- TIME_LAG_FOCUSING
: Instrument
- time_limit
: LPWrapper::SolverParam
- timedOut()
: MascotRemoteQuery
- timeMessure()
: Spectrum3DOpenGLCanvas
- timeOut()
: NetworkGetRequest
- timeout_
: MascotRemoteQuery
- timepoint_vali_
: GradientVisualizer
- timepoints_
: GradientVisualizer
- timers_
: FileWatcher
- timerTriggered_()
: FileWatcher
- times_
: Gradient
- timestamp
: LogStreamBuf::LogCacheStruct
- TimeType
: StopWatch
- tissue
: MzTabSampleMetaData
- title
: Citation
, MzTabMetaData
- TKeyword
: Pattern< TNeedle, FuzzyAC >
, PatternAuxData< TNeedle >
, Spawn< TNeedle >
- tmp_boxes_
: IsotopeWaveletTransform< PeakType >
- tmp_dir_
: SiriusAdapterAlgorithm::SiriusTemporaryFileSystemObjects
- tmp_ms_file_
: SiriusAdapterAlgorithm::SiriusTemporaryFileSystemObjects
- tmp_neighbors_
: QTCluster
- tmp_out_dir_
: SiriusAdapterAlgorithm::SiriusTemporaryFileSystemObjects
- tmp_path_
: TOPPASBase
, TOPPASScene
, TOPPASToolVertex
- TMT_SIXPLEX
: ItraqConstants
- TMTElevenPlexQuantitationMethod()
: TMTElevenPlexQuantitationMethod
- TMTSixPlexQuantitationMethod()
: TMTSixPlexQuantitationMethod
- TMTSixteenPlexQuantitationMethod()
: TMTSixteenPlexQuantitationMethod
- TMTTenPlexQuantitationMethod()
: TMTTenPlexQuantitationMethod
- to_
: MascotRemoteQuery
, TOPPASEdge
- toBool()
: DataValue
- toBracketString()
: AASequence
- toCellString()
: MzTabBoolean
, MzTabDouble
, MzTabDoubleList
, MzTabInteger
, MzTabIntegerList
, MzTabModification
, MzTabModificationList
, MzTabNullAbleInterface
, MzTabParameter
, MzTabParameterList
, MzTabSpectraRef
, MzTabString
, MzTabStringList
- toChar()
: DataValue
- toCSVString()
: QcMLFile::Attachment
- today()
: Date
- toDouble()
: String
, StringUtils
- toDoubleList()
: DataValue
- toExpandedString()
: MassDecomposition
- TOF
: MassAnalyzer
- TOF_
: MassAnalyzerVisualizer
- TOF_total_path_length_
: MassAnalyzer
- TOFCalibration()
: TOFCalibration
- toFloat()
: String
, StringUtils
- toggleAdvancedMode()
: ParamEditor
- toggleAxisLegends()
: TOPPViewBase
- toggleBreakpoint()
: TOPPASToolVertex
- toggleGridLines()
: TOPPViewBase
- toggleInterestingMZs()
: TOPPViewBase
- toggleMirrorView()
: Spectrum1DWidget
- toggleProjections()
: Spectrum2DCanvas
, Spectrum2DWidget
, TOPPViewBase
- toInt()
: String
, StringUtils
- toIntList()
: DataValue
- tokenize_()
: EnzymaticDigestion
- tol_
: MatchedIterator< CONT_T, TRAIT, CONST_T >
- tolerance
: EqualInTolerance< CompareType >
- tolerance_
: ListUtils::DoubleTolerancePredicate_
- tolerance_mz_
: TwoDOptimization
- tolerance_stdev_box_
: Fitter1D
- toleranceMZ_
: SuperHirnParameters
- ToleranceUnit
: FragmentMassError
- toLower()
: String
, StringListUtils
, StringUtils
- toMap()
: EmpiricalFormula
- toNative_()
: StringManager
- too_few_peptides
: PeptideAndProteinQuant::Statistics
- tool_bar_
: TOPPASBase
, TOPPViewBase
- tool_bar_1d_
: TOPPViewBase
- tool_bar_2d_cons_
: TOPPViewBase
- tool_bar_2d_feat_
: TOPPViewBase
- tool_bar_2d_ident_
: TOPPViewBase
- tool_bar_2d_peak_
: TOPPViewBase
- TOOL_CRASH
: TOPPASToolVertex
- tool_desc_
: ToolsDialog
- tool_description_
: TOPPBase
- tool_name_
: TOPPASToolConfigDialog
, TOPPBase
- TOOL_READY
: TOPPASToolVertex
- tool_ready_
: TOPPASToolVertex
- TOOL_RUNNING
: TOPPASToolVertex
- TOOL_SCHEDULED
: TOPPASToolVertex
- TOOL_SUCCESS
: TOPPASToolVertex
- tool_type_
: TOPPASToolConfigDialog
- toolCrashed()
: TOPPASBase
, TOPPASToolVertex
- toolCrashedSlot()
: TOPPASToolVertex
- ToolDescription()
: ToolDescription
- ToolDescriptionFile()
: ToolDescriptionFile
- ToolDescriptionHandler()
: ToolDescriptionHandler
- ToolDescriptionInternal()
: ToolDescriptionInternal
- toolDroppedOnWidget()
: TOPPASWidget
- toolFailed()
: TOPPASBase
, TOPPASToolVertex
- toolFailedSlot()
: TOPPASToolVertex
- toolFinished()
: TOPPASBase
, TOPPASToolVertex
- toolFinishedSlot()
: TOPPASToolVertex
- toolname_
: DocumentIDTagger
- toolName_()
: TOPPBase
- toolnameWithWhitespacesForFancyWordWrapping_()
: TOPPASToolVertex
- tools_combo_
: ToolsDialog
- tools_external_
: ToolHandler
- tools_external_loaded_
: ToolHandler
- tools_internal_
: ToolHandler
- tools_internal_loaded_
: ToolHandler
- tools_tree_view_
: TOPPASBase
- toolScheduledSlot()
: TOPPASToolVertex
- ToolsDialog()
: ToolsDialog
- toolStarted()
: TOPPASBase
, TOPPASToolVertex
- toolStartedSlot()
: TOPPASToolVertex
- TOOLSTATUS
: TOPPASToolVertex
- TOOLSTATUS_SIZE
: TOPPASToolVertex
- TOP
: AxisPainter
- TOP_MARGIN
: Spectrum1DCanvas
- top_matches_to_report_
: TargetedSpectraExtractor
- top_n_hits_
: SiriusAdapterAlgorithm
- topNmatch_fragmenterrors_
: SpectrumAnnotator
- topo_nr_
: TOPPASVertex
- topo_sort_marked_
: TOPPASVertex
- topoSort()
: TOPPASScene
- topp_
: TOPPViewBase
- topp_ini_file_
: TOPPBase
- topp_processes_queue_
: TOPPASScene
- TOPPAS
: FileTypes
- TOPPASBase()
: TOPPASBase
- TOPPASEdge()
: TOPPASEdge
- toppasFileDownloaded_()
: TOPPASBase
- TOPPASFilenames()
: TOPPASVertex::TOPPASFilenames
- TOPPASInputFileDialog()
: TOPPASInputFileDialog
- TOPPASInputFileListVertex()
: TOPPASInputFileListVertex
- TOPPASInputFilesDialog()
: TOPPASInputFilesDialog
- TOPPASIOMappingDialog()
: TOPPASIOMappingDialog
- TOPPASLogWindow()
: TOPPASLogWindow
- TOPPASMergerVertex()
: TOPPASMergerVertex
- TOPPASOutputFileListVertex()
: TOPPASOutputFileListVertex
- TOPPASOutputFilesDialog()
: TOPPASOutputFilesDialog
- TOPPASreadyRead()
: TOPPASBase
- TOPPASResource()
: TOPPASResource
- TOPPASResources()
: TOPPASResources
- TOPPASScene()
: TOPPASScene
- TOPPASSplitterVertex()
: TOPPASSplitterVertex
- TOPPASTabBar()
: TOPPASTabBar
- TOPPASToolConfigDialog()
: TOPPASToolConfigDialog
- TOPPASToolVertex()
: TOPPASToolVertex
- TOPPASTreeView()
: TOPPASTreeView
- TOPPASVertex()
: TOPPASVertex
- TOPPASVertexNameDialog()
: TOPPASVertexNameDialog
- TOPPASWidget()
: TOPPASWidget
- TOPPBase
: File
, TOPPBase
- TOPPGNPSExport()
: TOPPGNPSExport
- TOPPOpenPepXL()
: TOPPOpenPepXL
- TOPPOpenPepXLLF()
: TOPPOpenPepXLLF
- TOPPOpenSwathBase()
: TOPPOpenSwathBase
- toppOutputReady()
: TOPPASToolVertex
- TOPPProcess()
: TOPPASScene::TOPPProcess
- TOPPViewBase()
: TOPPViewBase
- TOPPViewIdentificationViewBehavior()
: TOPPViewIdentificationViewBehavior
- TOPPViewOpenDialog()
: TOPPViewOpenDialog
- TOPPViewPrefDialog()
: TOPPViewPrefDialog
- TOPPViewSpectraViewBehavior()
: TOPPViewSpectraViewBehavior
- TOPPXFDR()
: TOPPXFDR
- toQString()
: DataValue
, String
, StringUtils
- toString()
: AASequence
, Citation
, DataFilters::DataFilter
, DataValue
, EmpiricalFormula
, MassDecomposition
, RANSACParam
, MSstatsFile::MSstatsLine_
, MSstatsFile::MSstatsTMTLine_
, MultiGradient
, MZTrafoModel
, NASequence
, StopWatch
, TOPPASEdge
- toStringList()
: DataValue
- total_abundances
: PeptideAndProteinQuant::PeptideData
, PeptideAndProteinQuant::ProteinData
- total_current
: OPXLDataStructs::CrossLinkSpectrumMatch
- total_features
: PeptideAndProteinQuant::Statistics
- total_gradient_time_
: RTSimulation
- total_intensity
: PrecursorPurity::PurityScores
- total_intensity_
: FeatureFindingMetabo
- TOTAL_ION_CURRENT_CHROMATOGRAM
: ChromatogramSettings
- total_nr_peaks
: TwoDOptimization::Data
- total_peak_area
: SHFeature
- total_peptides
: PeptideAndProteinQuant::Statistics
- total_size_
: MSExperiment
- total_weight_reciprocal_
: FeatureDistance
- total_width
: PeakIntegrator::PeakShapeMetrics
- total_xic
: OpenSwath_Scores
- totalMatchedCurrent()
: XQuestScores
- toUniModString()
: AASequence
- toUnmodifiedString()
: AASequence
- toUpper()
: String
, StringListUtils
, StringUtils
- toXMLString()
: ControlledVocabulary::CVTerm
, QcMLFile::Attachment
, QcMLFile::QualityParameter
- TR
: MS1Signal
, MS2ConsensusSpectrum
, MS2Fragment
, MS2Info
, MSPeak
, SHFeature
- tr_
: CentroidPeak
- TR_APEX
: SHFeature
- TR_END
: SHFeature
- tr_gr_id_
: MRMTransitionGroup< ChromatogramType, TransitionType >
- TR_START
: SHFeature
- tr_table
: ToolExternalDetails
- trace_
: Param::ParamIterator
- trace_peaks_
: MassTrace
- trace_termination_criterion_
: MassTraceDetection
- trace_termination_outliers_
: MassTraceDetection
- trace_tolerance_
: FeatureFinderAlgorithmPicked
- TraceFitter()
: TraceFitter
- TraceInfo()
: Param::ParamIterator::TraceInfo
- traces_ptr
: TraceFitter::ModelData
- trackNoise()
: FIAMSDataProcessor
- trafo_external_
: FeatureFinderIdentificationAlgorithm
- train()
: HiddenMarkovModel
, MZTrafoModel
, SVMWrapper
- train_count_trans_all_
: HiddenMarkovModel
- train_emission_prob_
: HiddenMarkovModel
- trained_trans_
: HiddenMarkovModel
- training_data_
: SVMWrapper
- training_problem_
: SVMWrapper
- training_set_
: SVMWrapper
- training_steps_count_
: HiddenMarkovModel
- trainModel()
: SvmTheoreticalSpectrumGeneratorTrainer
- trainSecondaryTypes_()
: SvmTheoreticalSpectrumGeneratorTrainer
- TRAML
: FileTypes
- TraMLFile()
: TraMLFile
- TraMLHandler()
: TraMLHandler
- TraMLProduct()
: TraMLProduct
- TraMLValidator()
: TraMLValidator
- trans_
: HiddenMarkovModel
- trans_intens_
: IsotopeWaveletTransform< PeakType >::TransSpectrum
- trans_x_
: Spectrum3DOpenGLCanvas
- trans_y_
: Spectrum3DOpenGLCanvas
- transferSubelements()
: FeatureGroupingAlgorithm
- transform()
: ContinuousWaveletTransformNumIntegration
, MapAlignmentAlgorithmKD
, MzMLFile
, MzXMLFile
, SpectraSTSimilarityScore
, SqMassFile
- transform_()
: IsotopeDistribution
- Transformation_()
: IDDecoyProbability::Transformation_
- transformation_model_
: AbsoluteQuantitationMethod
- transformation_model_params_
: AbsoluteQuantitationMethod
- TransformationDescription()
: TransformationDescription
- TransformationModel()
: TransformationModel
- TransformationModelBSpline()
: TransformationModelBSpline
- TransformationModelInterpolated()
: TransformationModelInterpolated
- TransformationModelLinear()
: TransformationModelLinear
- TransformationModelLowess()
: TransformationModelLowess
- transformations_
: MapAlignmentAlgorithmKD
- TRANSFORMATIONXML
: FileTypes
- TransformationXMLFile()
: TransformationXMLFile
- transformFirstPass_()
: MzMLFile
, MzXMLFile
- transformPoint_()
: Spectrum3DOpenGLCanvas
- transformRetentionTimes()
: MapAlignmentTransformer
- transformScore_()
: PosteriorErrorProbabilityModel
- TRANSIENTRECORDER
: IonDetector
- Transition
: TargetedExperiment
, LightTargetedExperiment
- transition_flags_
: ReactionMonitoringTransition
- transition_map_
: ConfidenceScoring
, MRMTransitionGroup< ChromatogramType, TransitionType >
- transition_name
: TransitionTSVFile::TSVTransition
, LightTransition
- transition_quality_score
: MetaboTargetedAssay
- TransitionGroupMapType
: MRMFeatureFinderScoring
- TransitionGroupOpenMS()
: TransitionGroupOpenMS< SpectrumT, TransitionT >
- TransitionPQPFile()
: TransitionPQPFile
- transitions
: LightTargetedExperiment
, Peptide
- transitions_
: MRMTransitionGroup< ChromatogramType, TransitionType >
, TargetedExperiment
- TransitionsType
: MRMTransitionGroup< ChromatogramType, TransitionType >
- TransitionTSVFile()
: TransitionTSVFile
- TransitionType
: DIAScoring
, IonMobilityScoring
, MRMFeatureFinderScoring
, OpenSwathScoring
, OpenSwathWorkflow
, MRMScoring
- TransitionVectorType
: MRMAssay
, MRMDecoy
, TransitionTSVFile
- translateBackward_()
: Spectrum2DCanvas
, Spectrum3DCanvas
, SpectrumCanvas
- translateForward_()
: Spectrum2DCanvas
, Spectrum3DCanvas
, SpectrumCanvas
- translateIsotopeMatrix()
: ItraqConstants
- translateLeft_()
: Spectrum1DCanvas
, Spectrum2DCanvas
, Spectrum3DCanvas
, SpectrumCanvas
- translateRight_()
: Spectrum1DCanvas
, Spectrum2DCanvas
, Spectrum3DCanvas
, SpectrumCanvas
- translateVisibleArea_()
: Spectrum2DCanvas
- TransSpectrum()
: IsotopeWaveletTransform< PeakType >::TransSpectrum
- trapezoidal_area()
: FalseDiscoveryRate
, ROCCurve
- trapezoidal_area_xEqy()
: FalseDiscoveryRate
- traversed
: ProteinResolver::PeptideEntry
, ProteinResolver::ProteinEntry
- traversePeptide_()
: ProteinResolver
- traverseProtein_()
: ProteinResolver
- trCoord_
: BackgroundIntensityBin
- treatmentcomment_
: DigestionVisualizer
, ModificationVisualizer
, TaggingVisualizer
- treatments_
: Sample
- treatmenttype_
: DigestionVisualizer
, ModificationVisualizer
, TaggingVisualizer
- tree_
: ParamEditor
- tree_id_
: PeptideIdentificationVisualizer
, ProteinIdentificationVisualizer
- tree_timeout_
: SiriusAdapterAlgorithm
- treeGuidedAlignment()
: MapAlignmentAlgorithmTreeGuided
- treescore
: SiriusMzTabWriter::SiriusAdapterHit
- treeSize()
: KDTreeFeatureMaps
- treeview_
: MetaDataBrowser
- trEnd
: MS2Fragment
- trgroup_
: TransitionGroupOpenMS< SpectrumT, TransitionT >
- tricube_()
: LowessSmoothing
- trie_db_pos_length_
: InspectOutfile
- trie_delimiter_
: InspectOutfile
- trim()
: String
, StringUtils
- trim_right_cutoff_
: ExtendedIsotopeModel
, IsotopeModel
- trimIntensities()
: IsotopeDistribution
- trimLeft()
: IsotopeDistribution
- trimmed_left
: FeatureFinderAlgorithmPickedHelperStructs::TheoreticalIsotopePattern
- trimOpenMSfileURI()
: MzIdentMLHandler
- trimRight()
: IsotopeDistribution
- trimText_()
: TOPPASLogWindow
- trStart
: MS2Fragment
- trTol_
: SuperHirnParameters
- tryGnuplot()
: PosteriorErrorProbabilityModel
- tryptic_only_
: CompNovoIdentificationBase
- TSize
: Pattern< TNeedle, FuzzyAC >
, PatternAuxData< TNeedle >
, Spawn< TNeedle >
- TSP
: IonSource
- TSV
: FileTypes
- TSVToTargetedExperiment_()
: TransitionTSVFile
- tv
: TOPPASScene::TOPPProcess
- tv_
: TOPPViewIdentificationViewBehavior
, TOPPViewSpectraViewBehavior
- TV_ALLFINISHED
: TOPPASVertex
- TV_UNFINISHED
: TOPPASVertex
- TV_UNFINISHED_INBRANCH
: TOPPASVertex
- TVert
: Pattern< TNeedle, FuzzyAC >
, PatternAuxData< TNeedle >
, Spawn< TNeedle >
- two_d_optimization_
: PeakPickerCWT
- TwoDOptFunctor()
: TwoDOptimization::TwoDOptFunctor
- TwoDOptimization()
: TwoDOptimization
- TXT
: FileTypes
- Type
: FileTypes
, IonDetector
- type
: LayerData
- Type
: ListEditor
, LPWrapper
- type
: ParameterInformation
, PeakShape
- Type
: PeakShape
, PrecursorIonSelection
- type
: ProteinResolver::ProteinEntry
, ProteinResolver::ResolverResult
, TOPPASToolVertex::IOInfo
- Type
: BitsPerValue< AAcid >
, CompareTypeImpl< AAcid, char >
, CompareTypeImpl< AAcid, uint8_t >
, Host< Pattern< TNeedle, FuzzyAC > >
, Host< Pattern< TNeedle, FuzzyAC > const >
, ValueSize< AAcid >
- type_
: ChromatogramSettings
, ListEditorDelegate
, ListTable
, IonDetector
, IonDetectorVisualizer
, ListEditor
, MassAnalyzer
, MassAnalyzerVisualizer
, PrecursorIonSelection
, ProgressLogger
, SampleTreatment
, SpectrumSettings
, SpectrumSettingsVisualizer
, TOPPASToolVertex
- typeName_
: ListEditorDelegate
- TYPENULL
: IonDetector
- types
: ToolDescriptionInternal
- typeToMZML()
: FileTypes
- typeToName()
: FileTypes