- u -

• ui_ : DataFilterDialog , FeatureEditDialog , Spectrum1DPrefDialog , Spectrum2DPrefDialog , Spectrum3DPrefDialog , TOPPViewPrefDialog , LayerStatisticsDialog , ParamEditor , Spectrum1DGoToDialog , Spectrum2DGoToDialog , SpectrumAlignmentDialog , TheoreticalSpectrumGenerationDialog , TOPPASInputFileDialog , TOPPASInputFilesDialog , TOPPASIOMappingDialog , TOPPASOutputFilesDialog , TOPPASVertexNameDialog , TOPPViewOpenDialog
• uid_ : MSQuantifications::Assay
• uis_threshold_peak_area_ : MRMFeatureFinderScoring
• uis_threshold_sn_ : MRMFeatureFinderScoring
• ulod_ : AbsoluteQuantitationMethod
• uloq_ : AbsoluteQuantitationMethod
• unambiguous_score_ : AScore
• unassigned_contaminants_ratio : Contaminants::ContaminantsSummary
• unassigned_peptide_identifications_ : ConsensusMap , FeatureMap
• unassignedMS2 : FeatureMapping::FeatureToMs2Indices
• undo_button_ : BaseVisualizerGUI
• undobutton_ : MetaDataBrowser
• unidentified : IDMapper::SpectraIdentificationState
• unimod_ : MzIdentMLDOMHandler , MzIdentMLHandler
• unimod_id : Peptide::Modification , LightModification
• unimod_record_id_ : ResidueModification
• uniprot_id : TransitionTSVFile::TSVTransition
• unique : MzTabOligonucleotideSectionRow , MzTabPeptideSectionRow , MzTabPSMSectionRow
• unique_id : ConsensusMap::ColumnHeader
• unique_id_ : UniqueIdInterface
• unique_id_scores_ : XFDRAlgorithm
• unique_ids_ : XFDRAlgorithm
• uniqueid_to_index_ : UniqueIdIndexer< RandomAccessContainer >
• unit_ : CVTerm , DataValue
• unit_accession : SemanticValidator::CVTerm
• unit_accession_att_ : SemanticValidator
• unit_multiplier : MzMLHandlerHelper::BinaryData
• unit_name : SemanticValidator::CVTerm
• unit_name_att_ : SemanticValidator
• unit_ppm_ : BinnedSpectrum
• unit_type_ : DataValue
• unitAcc : QcMLFile::Attachment , QcMLFile::QualityParameter
• unitRef : QcMLFile::Attachment , QcMLFile::QualityParameter
• units : ControlledVocabulary::CVTerm
• UNKNOWN_AA : PeptideEvidence
• UNKNOWN_LOG_LEVEL : LogStreamBuf
• UNKNOWN_NEIGHBOR : MoleculeParentMatch
• UNKNOWN_POSITION : MoleculeParentMatch , PeptideEvidence
• unmodified_seq : OPXLDataStructs::AASeqWithMass
• unparsed : ControlledVocabulary::CVTerm
• UnspecificCleavage : EnzymaticDigestion
• up_stack_ : MzQuantMLHandler
• update_buffer_ : SpectrumCanvas
• upper : SwathMap
• upper_ : LinearRegression
• upperq : SummaryStatistics< T >
• uri : MzTabMetaData , MzTabNucleicAcidSectionRow , MzTabOligonucleotideSectionRow , MzTabOSMSectionRow , MzTabPeptideSectionRow , MzTabProteinSectionRow , MzTabPSMSectionRow , MzTabSmallMoleculeSectionRow
• URI : CV
• url : MzTabCVMetaData
• url_ : ContactPerson , ContactPersonVisualizer , NetworkGetRequest , TOPPASResource
• use_chauvenet_ : AbsoluteQuantitation
• use_coelution_score_ : OpenSwath_Scores_Usage
• use_consensus_ : MRMTransitionGroupPicker
• use_dia_scores_ : OpenSwath_Scores_Usage
• use_elution_model_score_ : OpenSwath_Scores_Usage
• use_external_boundaries_ : FullSwathFileConsumer
• use_feature_rt_ : MapAlignmentAlgorithmIdentification
• use_gauss_ : PeakPickerMRM , TargetedSpectraExtractor
• use_gpus_ : FeatureFinderAlgorithmIsotopeWavelet
• use_IDs_ : QTCluster , QTClusterFinder , StablePairFinder
• use_im_scores : OpenSwath_Scores_Usage
• use_intensity_score_ : OpenSwath_Scores_Usage
• use_library_score_ : OpenSwath_Scores_Usage
• use_lossy_compression_ : MzMLSqliteHandler
• use_lossy_numpress : SqMassFile::SqMassConfig
• use_mi_score_ : OpenSwath_Scores_Usage
• use_ms1_correlation : OpenSwath_Scores_Usage
• use_ms1_fullscan : OpenSwath_Scores_Usage
• use_ms1_ion_mobility_ : OpenSwathWorkflowBase
• use_ms1_mi : OpenSwath_Scores_Usage
• use_ms1_traces_ : OpenSwathOSWWriter , OpenSwathTSVWriter , OpenSwathWorkflowBase
• use_mz_scoring_by_element_range_ : FeatureFindingMetabo
• use_mz_scoring_C13_ : FeatureFindingMetabo
• use_nr_peaks_score_ : OpenSwath_Scores_Usage
• use_ppm_ : CalibrationData , MZTrafoModel
• use_ppm_tolerance_ : GaussFilterAlgorithm
• use_precursor_data_ : PepXMLFile
• use_precursors_ : MRMTransitionGroupPicker
• use_prefix_ : FuzzyStringComparator
• use_rt_score_ : OpenSwath_Scores_Usage
• use_sequence_tags_ : OpenPepXLLFAlgorithm
• use_shape_score_ : OpenSwath_Scores_Usage
• use_smoothed_intensities_ : FeatureFindingMetabo
• use_sn_score_ : OpenSwath_Scores_Usage
• use_sonar_scores : OpenSwath_Scores_Usage
• use_ssl_ : MascotRemoteQuery
• use_term_ : CVMappingTerm
• use_term_name_ : CVMappingTerm
• use_total_mi_score_ : OpenSwath_Scores_Usage
• use_total_prob_ : FineIsotopePatternGenerator
• use_total_xic_score_ : OpenSwath_Scores_Usage
• use_uis_scores : OpenSwath_Scores_Usage
• user_params_ : MSQuantifications::AnalysisSummary
• user_specified_out_dir_ : TOPPASScene