- i -

• IdentifiedCompound : IdentificationData
• IdentifiedCompoundRef : IdentificationData
• IdentifiedCompounds : IdentificationData
• IdentifiedMoleculeRef : IdentificationData
• IdentifiedOligo : IdentificationData
• IdentifiedOligoRef : IdentificationData
• IdentifiedOligos : IdentificationData
• IdentifiedPeptide : IdentificationData
• IdentifiedPeptideRef : IdentificationData
• IdentifiedPeptides : IdentificationData
• IDPointer : IDBoostGraph
• IDPointerConst : IDBoostGraph
• IndexMap_ : PeptideProteinResolution
• IndexPair : FeatureFinderDefs , IsotopeCluster
• IndexPosMappingType : PepNovoOutfile
• IndexScorePair : HyperScore
• IndexSet : FeatureFinderDefs , Fitter1D , IsotopeCluster
• IndexTriple : OfflinePrecursorIonSelection
• IndexType : MRMDecoy
• InputFileRef : IdentificationData
• InputFiles : IdentificationData
• InputType : GumbelMaxLikelihoodFitter::Functor< _Scalar, NX, NY >
• Instrument : TargetedExperiment
• integer_decomposer_type : RealMassDecomposer
• integer_value_type : RealMassDecomposer
• IntegerDataArray : MSChromatogram , MSSpectrum , ProteinIdentification::ProteinGroup
• IntegerDataArrays : MSChromatogram , MSSpectrum , ProteinIdentification::ProteinGroup
• Intensity : MSstatsFile
• IntensityMap : SvmTheoreticalSpectrumGenerator
• IntensityRangeType : RangeManager< D >
• IntensityType : Annotation1DItem , BaseModel< D > , ChromatogramPeak , ExtendedIsotopeModel , FeatureFinderAlgorithm , InterpolationModel , IsotopeModel , MSExperiment , Peak1D , Peak2D , ProductModel< 2 > , ProteinInference
• InterpolationModel : GaussModel
• Interpretation : TargetedExperiment
• IntType : CachedMzMLHandler
• IonMapT : MRMAssay
• IonScore : CompNovoIdentification , CompNovoIdentificationBase , CompNovoIdentificationCID , CompNovoIonScoring , CompNovoIonScoringCID
• IonSeries : MRMAssay , MRMIonSeries
• IonType : SvmTheoreticalSpectrumGeneratorTrainer , TargetedExperiment , Interpretation
• IsobaricChannelList : IsobaricQuantitationMethod
• IsotopeMatrices : ItraqConstants , ITRAQLabeler
• IsotopePattern : FeatureFinderAlgorithmPicked
• isotopes_type : IMSElement
• IsotopeType : CompNovoIdentification , CompNovoIdentificationCID , CompNovoIonScoring , CompNovoIonScoringCID
• ItemMap : IDFilter::GetMatchingItems< HitType, Entry >
• iterator : _Iterator< _Val, _Ref, _Ptr > , KDTree< __K, _Val, _Acc, _Dist, _Cmp, _Alloc >
• Iterator : Annotations1DContainer
• iterator : ConsensusFeature
• Iterator : ConsensusMap , ConstRefVector< ContainerT >
• iterator : ConstRefVector< ContainerT >
• Iterator : DPosition< D, TCoordinateType >
• iterator : DPosition< D, TCoordinateType >
• Iterator : EmpiricalFormula
• iterator : EmpiricalFormula , FeatureFinderAlgorithmPickedHelperStructs::MassTraces
• Iterator : FeatureMap
• iterator : HashGrid< Cluster > , IMSAlphabet
• Iterator : IsotopeDistribution
• iterator : IsotopeDistribution
• Iterator : Map< Key, T >
• iterator : MassTrace , Matrix< Value >
• Iterator : Matrix< Value > , MSChromatogram , MSExperiment
• iterator : MSExperiment
• Iterator : MSSpectrum , String , StringListUtils , TextFile
• iterator : XCorrArrayType
• iterator_category : _Iterator< _Val, _Ref, _Ptr > , AASequence::ConstIterator , ConstRefVector< ContainerT >::ConstRefVectorConstIterator< ValueT > , MatchedIterator< CONT_T, TRAIT, CONST_T > , NASequence::ConstIterator