- h -

• handleBinaryDataArray_() : MzMLSpectrumDecoder
• handleBinaryDataArrayCVParam() : MzMLHandlerHelper
• handleCVParam_() : MzIdentMLHandler , MzMLHandler , MzQuantMLHandler , TraMLHandler
• handlePTMs() : InspectInfile , SequestInfile
• handlePTMs_() : PepNovoInfile
• handleQueryMatch_() : FalseDiscoveryRate
• handleTerm_() : MzDataValidator , MzMLValidator , SemanticValidator
• handleUserParam_() : MzIdentMLHandler , MzMLHandler , MzQuantMLHandler , TraMLHandler
• has() : AASequence , Map< Key, T > , ModificationsDB , String , StringUtils
• HasActivationMethod() : HasActivationMethod< SpectrumType >
• hasBetterScore() : SimpleSearchEngineAlgorithm::AnnotatedHit_
• hasCharge() : PeptideCompound , TraMLProduct
• hasChromatogram() : MRMTransitionGroup< ChromatogramType, TransitionType >
• hasCNterminalMods_() : MRMDecoy
• hasCompound() : TargetedExperiment
• hasCTerminalModification() : AASequence
• hasCVReference() : CVMappings
• hasCVTerm() : CVTermList , CVTermListInterface
• HasDecoyAnnotation() : IDFilter::HasDecoyAnnotation< HitType >
• hasElement() : ElementDB , EmpiricalFormula
• hasEnzyme() : DigestionEnzymeDB< DigestionEnzymeType, InstanceType >
• hasError() : MascotRemoteQuery , NetworkGetRequest
• hasFactor() : ExperimentalDesign::SampleSection
• hasFilters() : PeakFileOptions
• hasFivePrimeMod() : NASequence
• HasGoodScore() : IDFilter::HasGoodScore< HitType >
• HashGrid() : HashGrid< Cluster >
• hasInferenceData() : ProteinIdentification
• hasInferenceEngineAsSearchEngine() : ProteinIdentification
• hasIntensityRange() : FeatureFileOptions , PeakFileOptions
• HasInvalidLength() : NucleicAcidSearchEngine::HasInvalidLength
• hasInvalidUniqueId() : UniqueIdInterface
• hasInverseOrientation() : AxisWidget
• hasLowIntensityReporter_() : IsobaricChannelExtractor
• HasMatchingAccession() : IDFilter::HasMatchingAccession< HitType >
• HasMatchingAccessionUnordered() : IDFilter::HasMatchingAccessionUnordered< HitType >
• HasMaxMetaValue() : IDFilter::HasMaxMetaValue< HitType >
• HasMaxRank() : IDFilter::HasMaxRank< HitType >
• HasMetaValue() : HasMetaValue< MetaContainer > , IDFilter::HasMetaValue< HitType >
• hasMS1Zeros() : TOPPViewBase
• hasMSLevels() : PeakFileOptions
• hasMZ() : PeptideIdentification
• hasMZRange() : FeatureFileOptions , PeakFileOptions
• hasName() : IMSAlphabet
• hasNeutralLoss() : Residue , ResidueModification
• hasNTerminalModification() : AASequence
• hasNTermNeutralLosses() : Residue
• hasPeptide() : TargetedExperiment
• hasPeptideIdentifications() : TOPPViewBase
• HasPrecursorCharge() : HasPrecursorCharge< SpectrumType >
• hasPrecursorChromatogram() : MRMTransitionGroup< ChromatogramType, TransitionType >
• hasPrecursorCVTerms() : ReactionMonitoringTransition
• hasPrediction() : ReactionMonitoringTransition
• hasPrefix() : AASequence , String , StringUtils
• hasProtein() : TargetedExperiment
• hasRegEx() : DigestionEnzymeDB< DigestionEnzymeType, InstanceType >
• hasResidue() : ResidueDB
• hasRetentionTime() : PeptideCompound
• hasRT() : PeptideIdentification
• hasRTRange() : FeatureFileOptions , PeakFileOptions
• hasSample() : ExperimentalDesign::SampleSection
• HasScanMode() : HasScanMode< SpectrumType >
• HasScanPolarity() : HasScanPolarity< SpectrumType >
• hasStream() : StreamHandler
• hasStream_() : LogStream
• hasSubsequence() : AASequence
• hasSubstring() : String , StringUtils
• hasSuffix() : AASequence , String , StringUtils
• hasTag() : Param
• hasTermWithName() : ControlledVocabulary
• hasThreePrimeMod() : NASequence
• hasTransition() : MRMTransitionGroup< ChromatogramType, TransitionType >
• hasUncommittedData() : ParamEditorDelegate
• hasUnit() : CVTerm , DataValue
• hasValidExtension() : FileHandler
• hasValidLimits() : PeptideEvidence
• hasValidPositions() : MoleculeParentMatch
• hasValidUniqueId() : UniqueIdInterface
• hasValue() : CVTerm
• HDF5Connector() : HDF5Connector
• headerContextMenu_() : SpectraIdentificationViewWidget
• headerMatches() : FASTAFile::FASTAEntry
• height() : DIntervalBase< D >
• heightColor_() : Spectrum2DCanvas
• HiddenMarkovModel() : HiddenMarkovModel
• hideAxes() : Spectrum1DWidget , SpectrumWidget
• highlightPeak_() : Spectrum2DCanvas
• Histogram() : Histogram< ValueType, BinSizeType >
• HistogramDialog() : HistogramDialog
• HistogramWidget() : HistogramWidget
• HMMState() : HMMState
• horizontalProjection() : Spectrum2DWidget
• horizontalScrollBarChange() : Spectrum1DCanvas , Spectrum2DCanvas , SpectrumCanvas
• hoveringEdgePosChanged() : TOPPASVertex
• HPLC() : HPLC
• HPLCVisualizer() : HPLCVisualizer