Here is a list of all class members with links to the classes they belong to:

- w -

• w_intensity_ : NucleicAcidSpectrumGenerator
• warn_empty_defaults_ : DefaultParamHandler
• warn_streams_ : LogConfigHandler
• warning() : MzMLHandlerHelper , XMLHandler , XMLValidator
• warnings_ : SemanticValidator
• was_enabled_ : GUILock
• was_valid_peptide_modification_ : UnimodXMLHandler
• wasChanged() : TOPPASScene
• watcher_ : TOPPViewBase
• watcher_msgbox_ : TOPPViewBase
• wavelet_ : ContinuousWaveletTransform
• webview_ : TOPPASBase
• weight : FeatureDistance::DistanceParams_ , ProteinResolver::ProteinEntry
• weight_mode_ : WeightWrapper
• weight_sum_ : AveragePosition< D >
• weight_type : Weights
• weightData() : TransformationModel
• weightDatum() : TransformationModel
• weighted : TraceFitter::ModelData
• weighted_ : TraceFitter
• weighted_coelution_score : OpenSwath_Scores
• weighted_massdev_score : OpenSwath_Scores
• weighted_mi_score : OpenSwath_Scores
• weighted_xcorr_shape : OpenSwath_Scores
• weightedTICScore() : XQuestScores
• weightedTICScoreXQuest() : XQuestScores
• weighting_ : TransformationModel
• WEIGHTMODE : WeightWrapper
• Weights() : Weights
• weights_ : RealMassDecomposer , Weights
• weights_type : Weights
• weightScore_() : MRMFeatureSelector , MRMFeatureSelector_test
• WeightWrapper() : WeightWrapper
• what() : BaseException
• what_ : BaseException , GlobalExceptionHandler
• wheelEvent() : SpectrumCanvas , TOPPASWidget
• when_where : Citation
• White2Original : MultiplexFiltering
• whitelist_ : FuzzyStringComparator
• whitelist_cases_ : FuzzyStringComparator
• widgetToData() : Spectrum1DCanvas
• widgetToData_() : SpectrumCanvas
• width() : DIntervalBase< D >
• width_ : BaseFeature , EmgFitter1D , EmgModel , FeatureHandle , Spectrum3DOpenGLCanvas
• width_at_10 : PeakIntegrator::PeakShapeMetrics
• width_at_5 : PeakIntegrator::PeakShapeMetrics
• width_at_50 : PeakIntegrator::PeakShapeMetrics
• WidthType : BaseFeature , FeatureHandle
• win_len_ : SignalToNoiseEstimatorMeanIterative< Container > , SignalToNoiseEstimatorMedian< Container >
• window_() : TOPPASBase , TOPPViewBase
• window_id_ : SpectrumWidget , TOPPASWidget
• window_length : SignalToNoiseEstimatorMedianRapid::NoiseEstimator
• window_length_ : SignalToNoiseEstimatorMedianRapid
• window_low_ : Precursor , PrecursorVisualizer , Product
• window_size_ : LowessSmoothing , ParentPeakMower
• window_up_ : Precursor , PrecursorVisualizer , Product
• WindowDistance_() : InclusionExclusionList::WindowDistance_
• WindowList : InclusionExclusionList
• WindowMower() : WindowMower
• windowMower_() : CompNovoIdentificationBase
• windowsize_ : WindowMower
• WIon : NASequence
• witness_vector_ : IntegerMassDecomposer< ValueType, DecompositionValueType >
• witness_vector_type : IntegerMassDecomposer< ValueType, DecompositionValueType >
• working_directory : ToolExternalDetails
• wout_ : LocalLinearMap
• wrap_() : XQuestResultXMLFile
• wrapSVM() : RTSimulation
• writable() : File
• write() : HiddenMarkovModel , OSWFile , SVOutStream , XTandemInfile
• write_convex_hull_ : MRMFeatureFinderScoring
• write_full_meta : SqMassFile::SqMassConfig
• write_full_meta_ : MzMLSqliteHandler
• write_index_ : PeakFileOptions
• write_log_messages_ : MRMFeatureFinderScoring , SignalToNoiseEstimatorMedian< Container >
• write_out_parsed_LC_MS() : FTPeakDetectController
• write_protein_description_ : PeptideIndexing
• write_protein_sequence_ : PeptideIndexing
• write_sn_log_messages_ : PeakPickerMRM
• write_supplemental_data_ : PeakFileOptions
• writeArgumentsLog_() : XFDRAlgorithm
• writeAttributeIfExists_() : MzXMLHandler
• writeBinary_() : MzDataHandler
• writeBinaryDataArray_() : MzMLHandler
• writeBinaryFloatDataArray_() : MzMLHandler
• writeChromatogram_() : CachedMzMLHandler , MzMLHandler
• writeChromatograms() : MzMLSqliteHandler
• writeConfiguration_() : TraMLHandler
• writeContainerData_() : MzMLHandler
• writeCTD_() : TOPPBase
• writeCV_() : MzMLHandler
• writeCVList_() : TraMLHandler
• writeCVParams_() : MzQuantMLHandler , TraMLHandler
• writeCVS_() : MzDataHandler
• writeDataProcessing_() : MzMLHandler
• writeDebug_() : TOPPBase
• writeDebugOutput() : MultiplexFilteredMSExperiment
• writeEnd() : FASTAFile
• writeEnzyme_() : MzIdentMLHandler
• writeExperiment() : MzMLSqliteHandler
• writeFeature_() : FeatureXMLFile , MzQuantMLHandler
• writeFeatureDebugInfo_() : FeatureFinderAlgorithmPicked
• writeFooter_() : MzMLHandlerHelper
• WriteFormat : LPWrapper
• writeFragmentAnnotations_() : IdXMLFile , MzIdentMLHandler
• writeGraphMLFile() : HiddenMarkovModel
• writeHeader() : OpenSwathOSWWriter , OpenSwathTSVWriter
• writeHeader_() : MzMLHandler , MascotGenericFile , MascotInfile
• writeHist() : PrecursorCorrection
• writeLines() : OpenSwathOSWWriter , OpenSwathTSVWriter
• writeLog_() : SwathTabWidget , TOPPBase
• writeMemdump() : CachedMzMLHandler
• writeMetadata() : CachedMzMLHandler
• writeMetadata_x() : CachedMzMLHandler
• writeMetaInfos_() : MzIdentMLHandler
• writeModifications_() : MascotGenericFile
• writeModParam_() : MzIdentMLHandler
• writeMSExperiment_() : MascotGenericFile , MascotInfile
• writeMsFile_() : SiriusMSFile
• writeMzIdentMLFile() : MzIdentMLDOMHandler
• writeNext() : FASTAFile
• writeNote_() : XTandemInfile
• writeOutFeaturesAndChroms_() : OpenSwathWorkflow
• writeParam_() : TOPPASToolVertex
• writeParameterHeader_() : MascotGenericFile , MascotInfile
• writeParametersToMetaValues() : DefaultParamHandler
• writePeakAnnotationsString_() : PeptideHit::PeakAnnotation
• writePeptideHeader_() : MzTabFile
• writePeptideHit() : MzIdentMLHandler
• writePeptideIdentification_() : ConsensusXMLFile , FeatureXMLFile
• writePQPOutput_() : TransitionPQPFile
• writePrecursor_() : MzMLHandler
• writeProblem() : LPWrapper
• writeProduct_() : MzMLHandler , TraMLHandler
• writeProteinData_() : MzTabFile
• writeProteinHeader_() : MzTabFile
• writeResults_() : Ms2IdentificationRate
• writeRetentionTime_() : TraMLHandler
• writeRunLevelInformation() : MzMLSqliteHandler
• writeSoftware_() : MzMLHandler
• writeSourceFile_() : MzMLHandler
• writeSpectra() : MzMLSqliteHandler
• writeSpectrum() : MascotGenericFile
• writeSpectrum_() : CachedMzMLHandler , MzMLHandler , MascotInfile
• writeStart() : FASTAFile
• writeTarget_() : TraMLHandler
• writeTargets() : InclusionExclusionList
• writeTo() : MzDataHandler , MzIdentMLHandler , MzMLHandler , MzQuantMLHandler , MzXMLHandler , PTMXMLHandler , ToolDescriptionHandler , TraMLHandler , XMLHandler , XQuestResultXMLHandler
• writeTo_() : XTandemInfile
• writeToFile() : TOPPASResource
• writeToFile_() : InclusionExclusionList
• writeToLogFile_() : TOPPASScene
• writeTrainingFile_() : SvmTheoreticalSpectrumGeneratorTrainer
• writeTSVOutput_() : TransitionTSVFile
• writeUserParam_() : MzDataHandler , MzMLHandler , MzXMLHandler , TraMLHandler , XMLHandler
• writeUserParams_() : MzQuantMLHandler , TraMLHandler
• writeValueOrNan() : SVOutStream
• writeWhitelistCases_() : FuzzyStringComparator
• writeXLMSPeptideHit() : MzIdentMLHandler
• writeXMLEscape() : XMLHandler
• writeXMLToStream() : ParamXMLFile
• writeXQuestXMLSpec() : XQuestResultXMLFile
• writeXvalResults() : SimpleSVM
• writing_chromatograms_ : MSDataWritingConsumer
• writing_spectra_ : MSDataWritingConsumer
• wrong_experiment_ : PepXMLFile
• WrongParameterType() : WrongParameterType
• ws_ : MetaDataBrowser , TOPPASBase , TOPPViewBase
• wTIC : OPXLDataStructs::CrossLinkSpectrumMatch
• wTICold : OPXLDataStructs::CrossLinkSpectrumMatch