Here is a list of all variables with links to the classes they belong to:
- s -
- s_list : MSDataAggregatingConsumer
- s_tmp : MSDataAggregatingConsumer
- sample : ExperimentalDesign::MSFileSectionEntry, MzTabMetaData, MzTabMMetaData
- sample_ : ExperimentalSettings
- sample_name : AbsoluteQuantitationStandards::runConcentration, ExperimentalDesign::MSFileSectionEntry
- sample_processing : MzTabMetaData, MzTabMMetaData
- sample_ref : MzTabAssayMetaData, MzTabMAssayMetaData
- sample_refs : MzTabStudyVariableMetaData
- sample_section_ : ExperimentalDesign
- sample_to_rowindex_ : ExperimentalDesign::SampleSection
- samplecomment_ : SampleVisualizer
- sampleconcentration_ : SampleVisualizer
- samplemass_ : SampleVisualizer
- samplename_ : SampleVisualizer
- samplenumber_ : SampleVisualizer
- sampleorganism_ : SampleVisualizer
- samples_ : FIAMSScheduler, MzMLHandler
- samples_labels_ : MultiplexDeltaMassesGenerator
- samplestate_ : SampleVisualizer
- samplevolume_ : SampleVisualizer
- satellites_ : MultiplexFilteredPeak
- satellites_profile_ : MultiplexFilteredPeak
- saveallbutton_ : MetaDataBrowser
- scale_ : EuclideanSimilarity, LinearInterpolation< Key, Value >
- scale_0_ : BilinearInterpolation< Key, Value >
- scale_1_ : BilinearInterpolation< Key, Value >
- scaling_ : InterpolationModel
- scan : FLASHHelperClasses::IsobaricQuantities
- scan_count_ : MzMLHandler, MzXMLHandler
- scan_count_total_ : MzMLHandler
- scan_counter : MassTraceDetection::TraceExtensionState
- scan_dir_ : MassAnalyzerVisualizer
- scan_direction_ : MassAnalyzer
- scan_event_number : Ms2SpectrumStats::ScanEvent
- scan_idx : MassTraceDetection::Apex
- scan_index : NucleicAcidSearchEngine::PrecursorInfo
- scan_index_heavy : OPXLDataStructs::CrossLinkSpectrumMatch
- scan_index_light : OPXLDataStructs::CrossLinkSpectrumMatch
- scan_indices : Biosaur2Algorithm::Hill, SiriusMSFile::CompoundInfo
- scan_law_ : MassAnalyzer, MassAnalyzerVisualizer
- scan_map_ : PepXMLFile
- scan_mode_ : InstrumentSettings, TOPPViewBase
- scan_number : FLASHHelperClasses::MassFeature, SpectrumMetaDataLookup::SpectrumMetaData
- scan_number_ : DeconvolvedSpectrum, PeakGroup
- scan_polarity : MzTabMMSRunMetaData
- scan_rate_ : MassAnalyzer, MassAnalyzerVisualizer
- scan_regexp_ : SpectrumLookup
- scan_time_ : MassAnalyzer, MassAnalyzerVisualizer
- scan_windows_ : InstrumentSettings
- scannr_ : PepXMLFile
- scans : IsotopeCluster
- scans_ : SpectrumLookup
- scene_ : TOPPASWidget
- schema_location_ : XMLFile, ParamCTDFile
- schema_version_ : MzIdentMLDOMHandler, XMLFile, ParamCTDFile
- scope_path_ : CVMappingRule
- score : IDFilter::HasGoodScore< HitType >, IDBoostGraph::ProteinGroup, MorpheusScore::Result, NuXLAnnotatedHit, NuXLReportRow, OPXLDataStructs::CrossLinkSpectrumMatch, OSWFile::PercolatorFeature, PeptideSearchEngineFIAlgorithm::AnnotatedHit_, SimpleSearchEngineAlgorithm::AnnotatedHit_, TargetedSpectraExtractor::Match
- score_ : ChargePair, PeptideHit, ProteinHit
- score_clas_pairs_ : ROCCurve
- score_cutoff_ : MapAlignmentAlgorithmIdentification
- score_name : IDScoreSwitcherAlgorithm::ScoreSearchResult
- score_switched : IDScoreSwitcherAlgorithm::IDSwitchResult
- score_type : PeptideHit::PepXMLAnalysisResult
- score_type_ : InspectOutfile, MapAlignmentAlgorithmIdentification, PeptideIdentification, PeptideIdentificationVisualizer, ProteinIdentificationVisualizer
- score_type_keys_ : OMSFileStore
- score_type_names : PercolatorOutfile
- score_type_refs : IdentificationData::RefTranslator
- score_type_refs_ : OMSFileLoad
- score_types_ : IdentificationData
- score_weights : MRMFeatureSelector::SelectorParameters
- scores : ConsensusIDAlgorithm::HitInfo, AppliedProcessingStep, ParentGroup
- scoring_model_ : MRMFeatureFinderScoring
- scouts : ACTrieState
- sd_ : FLASHDeconvAlgorithm
- sd_map_ : MzIdentMLDOMHandler
- sd_noise_decoy_ : FLASHDeconvAlgorithm
- sd_signal_decoy_ : FLASHDeconvAlgorithm
- search_database_ref : MzIdentMLDOMHandler::SpectrumIdentification
- search_engine : MzTabNucleicAcidSectionRow, MzTabOligonucleotideSectionRow, MzTabOSMSectionRow, MzTabPeptideSectionRow, MzTabProteinSectionRow, MzTabPSMSectionRow, MzTabSmallMoleculeSectionRow
- search_engine_ : MzIdentMLDOMHandler, PepXMLFile, ProteinIdentification
- search_engine_identifier : AccurateMassSearchEngine
- search_engine_score : MzTabOSMSectionRow, MzTabPSMSectionRow
- search_engine_score_ms_run : MzTabNucleicAcidSectionRow, MzTabOligonucleotideSectionRow, MzTabPeptideSectionRow, MzTabProteinSectionRow, MzTabSmallMoleculeSectionRow
- search_engine_version_ : MzIdentMLDOMHandler, ProteinIdentification
- search_id_ : PepXMLFile
- search_identifier_ : MascotRemoteQuery
- search_param_ : ConsensusXMLHandler, FeatureXMLHandler
- search_param_keys_ : OMSFileStore
- search_param_refs : IdentificationData::RefTranslator
- search_param_refs_ : OMSFileLoad
- search_parameters_ : MascotXMLHandler, ProteinIdentification
- search_score_ : TriqlerFile::TriqlerLine_
- search_score_summary_ : PepXMLFile
- search_summary_ : PepXMLFile
- searched_mass_ : AccurateMassSearchResult
- searchtype : MzIdentMLDOMHandler::SpectrumIdentificationProtocol
- second : ProbablePhosphoSites, TransformationModel::DataPoint
- second_nearest_gap_ : StablePairFinder
- second_row_ : NeedlemanWunsch
- secondary_id_ : SpectralMatch
- seed_ : UniqueIdGenerator
- seed_rt_window_ : FeatureFinderIdentificationAlgorithm
- seeds_ : FeatureFinderAlgorithmPicked
- seen_experiment_ : PepXMLFile
- segment_step_length : MRMFeatureSelector::SelectorParameters
- segment_window_length : MRMFeatureSelector::SelectorParameters
- select_sql : TransitionPQPFile::PQPSqlQueryInfo
- select_transition_group : MRMFeatureSelector::SelectorParameters
- selected_ : Annotation1DItem, MultiGradientSelector
- selected_activation_ : IsobaricChannelExtractor
- selected_color_ : MultiGradientSelector
- selected_ion_count_ : MzMLHandler
- selected_peak_ : Plot2DCanvas, PlotCanvas
- selected_pen_ : Annotations1DContainer
- selection_view_ : TOPPViewBase
- selector_ : MRMFeatureSelector_test
- semi_cleavage_ : XTandemInfile
- sep_ : MzTabStringList, SVOutStream, CSVWriter
- seq_ : FASTAFile, NASequence, OSWPeptidePrecursor
- seq_1 : ProbablePhosphoSites
- seq_2 : ProbablePhosphoSites
- seq_type_ : TheoreticalSpectrumGenerationDialog
- sequence : NucleicAcidSearchEngine::AnnotatedHit, FASTAFile::FASTAEntry, IdentifiedSequence< SeqType >, ParentSequence, MzIdentMLDOMHandler::DBSequence, MzTabOligonucleotideSectionRow, MzTabOSMSectionRow, MzTabPeptideSectionRow, MzTabPSMSectionRow, NuXLAnnotatedHit, PeptideSearchEngineFIAlgorithm::AnnotatedHit_, SimpleSearchEngineAlgorithm::AnnotatedHit_, Peptide, Protein, LightCompound, LightProtein, Peptide, Protein
- sequence_ : FragmentIndex::Peptide, IMSElement, MSstatsFile::MSstatsLine_, MSstatsFile::MSstatsTMTLine_, PeptideHit, ProteinHit, TriqlerFile::TriqlerLine_
- sequence_header_filter_ : SequestInfile
- sequence_score : NuXLAnnotatedHit
- seriesposition_regex_ : SpectrumAnnotator
- server_path_ : MascotRemoteQuery
- set : EmgFitter1D::Data
- set_Name_ID_map_ : QcMLFile
- setQualityAts_ : QcMLFile
- setQualityQPs_ : QcMLFile
- setQualityQPs_members_ : QcMLFile
- setting : MzTabSoftwareMetaData
- settings_ : FullSwathFileConsumer, MSDataWritingConsumer
- sf_accession : SiriusMSFile::AccessionInfo
- sf_filename : SiriusMSFile::AccessionInfo
- sf_path : SiriusMSFile::AccessionInfo
- sf_type : SiriusMSFile::AccessionInfo
- sgfilter_ : FIAMSDataProcessor
- sgolay_ : PeakPickerChromatogram, PeakPickerMobilogram
- sgolay_frame_length_ : PeakPickerChromatogram, PeakPickerIM, PeakPickerMobilogram
- sgolay_polynomial_order_ : PeakPickerChromatogram, PeakPickerIM, PeakPickerMobilogram
- shift : NuXLFragmentAnnotationHelper::FragmentAnnotationDetail_
- short_name : MultiplexDeltaMassesGenerator::Label
- show_alignment_ : Plot1DCanvas
- show_fragment_ions_ : SequestInfile
- show_grid_ : PlotCanvas
- show_legend_ : AxisWidget
- show_splitters_ : HistogramWidget
- show_timing_ : PlotCanvas
- shuffler_ : ConfidenceScoring, DecoyGenerator, RANSAC< TModelType >
- si_map_ : MzIdentMLDOMHandler
- si_pro_map_ : MzIdentMLDOMHandler
- sidx_ : SpectrumAccessSqMass
- sigma : GaussFitter::GaussFitResult
- sigma_ : EGHTraceFitter, GaussFilterAlgorithm, GaussTraceFitter
- sigma_5_bound_ : EGHTraceFitter
- signal_not_unique : ChannelQC
- signal_proportion : PrecursorPurity::PurityScores
- signal_to_noise_ : FeatureFinderAlgorithmMetaboIdent, FeatureFinderIdentificationAlgorithm, PeakPickerChromatogram, PeakPickerHiRes, PeakPickerIterative, PeakPickerMobilogram
- sil_2_sdat_ : MzIdentMLHandler
- sil_2_sdb_ : MzIdentMLHandler
- sil_2_sip_ : MzIdentMLHandler
- similarities_ : ConsensusIDAlgorithmSimilarity
- single_mobilogram_ : LayerDataIonMobility
- singleMass_ : Adduct
- site : MzTabModificationMetaData
- sites_ : UnimodXMLHandler
- size : ConsensusMap::ColumnHeader
- SIZE : IMSIsotopeDistribution
- size : IDBoostGraph::ProteinGroup, MzMLHandlerHelper::BinaryData
- size_ : ClusterProxyKD, StringView
- size_only_ : FeatureFileOptions, FeatureXMLHandler
- size_proportions_ : SaveImageDialog
- size_ratio_ : SaveImageDialog
- size_x_ : SaveImageDialog
- size_y_ : SaveImageDialog
- skip_chromatogram_ : MzMLHandler
- skip_chromatograms_ : PeakFileOptions
- skip_data : MzXMLHandler::SpectrumData
- skip_protein_acc_update_ : XTandemXMLFile
- skip_spectrum_ : MzDataHandler, MzMLHandler, MzXMLHandler
- skip_xml_checks_ : IndexedMzMLHandler, MzMLSpectrumDecoder, PeakFileOptions
- slope_ : LinearRegression, TransformationModelLinear
- slope_bound_ : FeatureFinderAlgorithmPicked
- slope_max_ : TransformationModelBSpline
- slope_min_ : TransformationModelBSpline
- slope_of_baseline : PeakIntegrator::PeakShapeMetrics
- sm_ : XMLHandler
- small_molecule_abundance_assay : MzTabMSmallMoleculeSectionRow
- small_molecule_abundance_study_variable : MzTabMSmallMoleculeSectionRow
- small_molecule_abundance_variation_study_variable : MzTabMSmallMoleculeSectionRow
- small_molecule_data_ : MzTab
- small_molecule_feature_abundance_assay : MzTabMSmallMoleculeFeatureSectionRow
- small_molecule_feature_quantification_unit : MzTabMMetaData
- small_molecule_identification_reliability : MzTabMMetaData
- small_molecule_quantification_unit : MzTabMetaData, MzTabMMetaData
- smallest_score_ : PosteriorErrorProbabilityModel
- smallmolecule_abundance_assay : MzTabSmallMoleculeSectionRow
- smallmolecule_abundance_std_error_study_variable : MzTabSmallMoleculeSectionRow
- smallmolecule_abundance_stdev_study_variable : MzTabSmallMoleculeSectionRow
- smallmolecule_abundance_study_variable : MzTabSmallMoleculeSectionRow
- smallmolecule_search_engine_score : MzTabMetaData
- sme_id_ref_ambiguity_code : MzTabMSmallMoleculeFeatureSectionRow
- sme_id_refs : MzTabMSmallMoleculeFeatureSectionRow
- sme_identifier : MzTabMSmallMoleculeEvidenceSectionRow
- sme_optional_column_names_ : MzTabM
- smf_id_refs : MzTabMSmallMoleculeSectionRow
- smf_identifier : MzTabMSmallMoleculeFeatureSectionRow
- smf_optional_column_names_ : MzTabM
- smile : IdentifiedCompound
- smiles : MzTabMSmallMoleculeEvidenceSectionRow, MzTabMSmallMoleculeSectionRow, MzTabSmallMoleculeSectionRow
- SMILES : TransitionTSVFile::TSVTransition
- smiles : LightCompound
- smiles_string : Compound
- smiles_string_ : SpectralMatch
- sml_identifier : MzTabMSmallMoleculeSectionRow
- sml_optional_column_names_ : MzTabM
- smoothed_intensities_ : MassTrace
- sn_ : SignalToNoiseOpenMS< ContainerT >
- sn_bin_count_ : MRMFeatureFinderScoring, PeakPickerChromatogram, PeakPickerIterative, PeakPickerMobilogram
- sn_ratio : OpenSwath_Scores
- SN_statistics_ : SpectrumAnnotator
- sn_win_len_ : MRMFeatureFinderScoring, PeakPickerChromatogram, PeakPickerIterative, PeakPickerMobilogram
- snap_factors_ : PlotCanvas
- snd_database_ : SequestInfile
- snr_ : PeakGroup
- snr_mul_factor_ : FLASHHelperClasses::PrecalculatedAveragine
- snr_weight_ : TargetedSpectraExtractor
- snt_ : PeakPickerChromatogram
- software : MzTabMetaData, MzTabMMetaData, MzTabSoftwareMetaData
- software_ : DataProcessing, Instrument, MzMLHandler, TargetedExperiment
- software_name_ : SoftwareVisualizer
- software_ref : ProcessingStep, Prediction, RetentionTime
- software_version_ : SoftwareVisualizer
- solver_ : LPWrapper
- sort_by_position_ : TheoreticalSpectrumGenerator
- sort_chromatograms_by_rt_ : PeakFileOptions
- sort_spectra_by_mz_ : PeakFileOptions
- sorted_ : ROCCurve
- source : MzTabInstrumentMetaData
- source_feature_index_ : AccurateMassSearchResult
- source_file : SiriusMSFile::CompoundInfo
- source_file_ : ChromatogramSettings, OSWData, SpectrumSettings
- source_files_ : ExperimentalSettings, MzMLHandler, TargetedExperiment
- source_format : SiriusMSFile::CompoundInfo
- source_out_param_ : TOPPASEdge
- sp_ : EnhancedTabBarWidgetInterface
- sp_map_ : MzIdentMLDOMHandler
- spacer_ : Plot1DWidget
- spacing_ : GaussFilter, GaussFilterAlgorithm, LinearResampler
- spacing_difference_ : PeakPickerHiRes, PeakPickerIterative
- spacing_difference_gap_ : PeakPickerHiRes
- spacing_for_spectra_resampling_ : MRMFeatureFinderScoring, OpenSwathScoring
- sparse_window_percent_ : SignalToNoiseEstimatorMedian< Container >
- spec_ : DeconvolvedSpectrum, MzDataHandler, MzMLHandler, MSSpectrum::Chunks, TheoreticalSpectrumGenerationDialog
- spec_gen_ : NeighborSeq
- spec_gen_dialog_ : TOPPViewBase
- spec_id_ : MzMLSqliteHandler, MzMLSqliteSwathHandler
- spec_id_view_ : TVIdentificationViewController
- spec_ref_ : MzTabSpectraRef
- spec_write_counter_ : MzXMLHandler
- species : MzTabNucleicAcidSectionRow, MzTabProteinSectionRow, MzTabSampleMetaData, MzTabSmallMoleculeSectionRow
- specificities : MzIdentMLDOMHandler::ModificationParam
- specificity_ : EnzymaticDigestion
- specref_format : SiriusMSFile::CompoundInfo
- specrefs : SiriusMSFile::CompoundInfo
- spectra_ : InspectInfile, MSDataSqlConsumer, MSExperiment, SpectrumAccessOpenMSInMemory
- spectra_addition_method_ : OpenSwathScoring
- spectra_all_peaks : OPXLDataStructs::PreprocessedPairSpectra
- spectra_before_chroms_ : IndexedMzMLHandler
- spectra_combo_box_ : DIATreeTab, SpectraTreeTab
- spectra_data : IDRipper::IdentificationRuns
- spectra_data_ref : MzIdentMLDOMHandler::SpectrumIdentification, SpectrumMetaDataLookup
- spectra_expected_ : MSDataWritingConsumer
- spectra_index_ : CachedmzML, CachedMzMLHandler
- spectra_linear_peaks : OPXLDataStructs::PreprocessedPairSpectra
- spectra_merge_method_type_ : OpenSwathScoring
- spectra_meta_ : SpectrumAccessOpenMSInMemory
- spectra_native_ids_ : IndexedMzMLHandler, OnDiscMSExperiment
- spectra_offsets_ : IndexedMzMLHandler, MzMLHandler
- spectra_ref : MzTabMSmallMoleculeEvidenceSectionRow, MzTabOSMSectionRow, MzTabPeptideSectionRow, MzTabPSMSectionRow, MzTabSmallMoleculeSectionRow
- spectra_search_box_ : DIATreeTab, SpectraTreeTab
- spectra_treewidget_ : SpectraTreeTab
- spectra_view_widget_ : DataSelectionTabs
- spectra_written_ : MSDataCachedConsumer, MSDataWritingConsumer
- spectra_xlink_peaks : OPXLDataStructs::PreprocessedPairSpectra
- spectraview_controller_ : DataSelectionTabs
- spectrum : FeatureFinderAlgorithmPickedHelperStructs::IsotopePattern, FeatureFinderAlgorithmPickedHelperStructs::Seed, MzMLHandler::SpectrumData, MzXMLHandler::SpectrumData, MetaboTargetedAssay::CompoundSpectrumPair, PeakIndex, TargetedSpectraExtractor::Match
- spectrum_addition_method_ : MRMFeatureFinderScoring
- spectrum_data_ : MzMLHandler, MzXMLHandler
- spectrum_identification_list_ref : MzIdentMLDOMHandler::SpectrumIdentification
- spectrum_identification_protocol_ref : MzIdentMLDOMHandler::SpectrumIdentification
- spectrum_identifications_ : Identification
- spectrum_ids_ : XTandemXMLFile
- spectrum_index_heavy_ : XQuestResultXMLHandler
- spectrum_index_light_ : XQuestResultXMLHandler
- spectrum_input_file_ : XQuestResultXMLHandler
- spectrum_merge_method_type_ : MRMFeatureFinderScoring
- spectrum_ranges_ : MSExperiment
- spectrum_widget_ : LayerListView, PlotCanvas
- spline_ : BSpline2d, SplinePackage, TransformationModelBSpline
- sptr : SwathMap
- sptr_ : SpectrumAccessTransforming
- sql_batch_size_ : MzMLSqliteHandler
- sqrt2pi : EmgFitter1D::EgmFitterFunctor
- sqrt_2 : EmgFitter1D::EgmFitterFunctor
- sr_map_ : MzIdentMLDOMHandler
- src : RangeStatsType
- ss_ : SVOutStream
- st_ : Annotation1DCaret< DataPoint >
- stack_ : Param::ParamIterator
- stand_dev_residuals_ : LinearRegression
- stand_error_slope_ : LinearRegression
- start : FeatureFinderIdentificationAlgorithm::RTRegion, MzIdentMLDOMHandler::PeptideEvidence, MSSpectrum::Chunk, MzTabOligonucleotideSectionRow, MzTabPSMSectionRow
- start_ : PeptideEvidence
- start_point_ : Annotation1DDistanceItem
- start_pos : ParentMatch
- start_position_at_10 : PeakIntegrator::PeakShapeMetrics
- start_position_at_5 : PeakIntegrator::PeakShapeMetrics
- start_position_at_50 : PeakIntegrator::PeakShapeMetrics
- start_time : StopWatch::TimeDiff_
- start_time_usec : StopWatch::TimeDiff_
- started_writing_ : MSDataWritingConsumer
- state : TheoreticalSpectrumGenerationDialog::CheckBox
- state_ : MzTabDouble, MzTabInteger, Sample
- states : AnnotationStatistics
- statistics1_ : BiGaussFitter1D, BiGaussModel
- statistics2_ : BiGaussFitter1D, BiGaussModel
- statistics_ : EmgModel, Fitter1D, GaussModel, PeptideProteinResolution
- stats : LayerDataDefs::ProjectionData
- stats_ : IsobaricQuantifier, LayerStatisticsDialog, PeptideAndProteinQuant
- status_ : PepXMLFile, TOPPASToolVertex
- status_list_ : MetaDataBrowser
- stdev_ : SignalToNoiseEstimatorMeanIterative< Container >
- steps_and_scores : ScoredProcessingResult
- stickdata_ : Plot3DOpenGLCanvas
- stn_estimates_ : SignalToNoiseEstimator< Container >
- stop : MzIdentMLDOMHandler::PeptideEvidence
- stop_after_feature_ : MRMTransitionGroupPicker
- stop_after_intensity_ratio_ : MRMTransitionGroupPicker
- stop_condition_ : FineIsotopePatternGenerator
- stop_report_after_feature_ : MRMFeatureFinderScoring
- storage_formats_ : LayerStoreData
- store_ : DataMatrix
- store_compact_ : MascotGenericFile
- store_nucleic_acid_goterms_ : MzTabFile
- store_nucleic_acid_reliability_ : MzTabFile
- store_nucleic_acid_uri_ : MzTabFile
- store_oligonucleotide_reliability_ : MzTabFile
- store_oligonucleotide_uri_ : MzTabFile
- store_osm_reliability_ : MzTabFile
- store_osm_uri_ : MzTabFile
- store_peptide_reliability_ : MzTabFile
- store_peptide_uri_ : MzTabFile
- store_protein_goterms_ : MzTabFile
- store_protein_reliability_ : MzTabFile
- store_protein_uri_ : MzTabFile
- store_psm_reliability_ : MzTabFile
- store_psm_uri_ : MzTabFile
- store_smallmolecule_reliability_ : MzTabFile
- store_smallmolecule_uri_ : MzTabFile
- strarray_ : TransitionTSVFile
- stream : LogStreamBuf::StreamStruct
- stream_ : IndentedStream, IDBoostGraph::PrintAddressVisitor< CharT >, LogStreamNotifier
- stream_at_end_ : Bzip2Ifstream, GzipIfstream
- stream_list_ : LogStreamBuf
- stream_type_map_ : LogConfigHandler
- strict_ : MRMFeatureFinderScoring
- string_data_arrays_ : Mobilogram, MSChromatogram, MSSpectrum, ProteinIdentification::ProteinGroup
- strip_namespaces_ : CVMappingFile
- struct_size_in_datapoints_ : MorphologicalFilter
- study_variable : MzTabMetaData, MzTabMMetaData
- stw_ : WizardGUILock< TWidgetClass >
- su_ : MRMFeatureFinderScoring, OpenSwathScoring
- sub_index : FeatureFinderAlgorithmMetaboIdent::MassTraceBounds
- sub_scores : PeptideHit::PepXMLAnalysisResult
- subordinate_feature_level_ : FeatureXMLHandler
- subordinates_ : Feature
- subquery_score_ : OMSFileLoad
- subsamples_ : Sample
- subsections_ : DefaultParamHandler, TOPPBase
- subsections_TOPP_ : TOPPBase
- success : DecoyHelper::Result, FalseDiscoveryRate::DecoyStringHelper::Result
- suffix : ACNode
- suffix_fraction : PeptideSearchEngineFIAlgorithm::AnnotatedHit_, SimpleSearchEngineAlgorithm::AnnotatedHit_
- suit_ : DBSuitability_friend
- suitability : DBSuitability::SuitabilityData
- suitability_corr : DBSuitability::SuitabilityData
- suitability_corr_no_rerank : DBSuitability::SuitabilityData
- suitability_no_rerank : DBSuitability::SuitabilityData
- sum_ : BasicStatistics< RealT >, RangeStats< VALUE_TYPE >
- sum_formula : LightCompound
- sum_formula_ : SpectralMatch
- sum_intensity : LayerDataDefs::ProjectionData::Summary
- sum_tolerance_im_ : PeakPickerIM
- sum_tolerance_mz_ : PeakPickerIM
- sum_xx_ : LinearRegressionWithoutIntercept
- sum_xy_ : LinearRegressionWithoutIntercept
- SumFormula : TransitionTSVFile::TSVTransition
- superimposer_ : MapAlignmentAlgorithmPoseClustering
- support : ConsensusIDAlgorithm::HitInfo
- supported_schemes : TOPPASResource
- supported_types_ : LayerAnnotatorBase
- svm : NuXLRTPrediction
- svm_feat_centers_ : FeatureFindingMetabo
- svm_feat_scales_ : FeatureFindingMetabo
- svm_min_prob_ : FeatureFinderIdentificationAlgorithm, FFIDAlgoExternalIDHandler
- svm_n_parts_ : FeatureFinderIdentificationAlgorithm, FFIDAlgoExternalIDHandler
- svm_n_samples_ : FeatureFinderIdentificationAlgorithm, FFIDAlgoExternalIDHandler
- svm_predictor_names_ : FeatureFinderIdentificationAlgorithm, FFIDAlgoExternalIDHandler
- svm_probs_external_ : FeatureFinderIdentificationAlgorithm, FFIDAlgoExternalIDHandler
- svm_probs_internal_ : FeatureFinderIdentificationAlgorithm, FFIDAlgoExternalIDHandler
- svm_quality_cutoff : FeatureFinderIdentificationAlgorithm, FFIDAlgoExternalIDHandler
- svm_xval_out_ : FeatureFinderIdentificationAlgorithm, FFIDAlgoExternalIDHandler
- swath_assay_ : PepXMLFile
- swath_consumers_ : CachedSwathFileConsumer, MzMLSwathFileConsumer
- swath_map_boundaries_ : FullSwathFileConsumer
- swath_maps_ : FullSwathFileConsumer
- swath_param_ : SwathTabWidget
- swath_param_wizard_ : SwathTabWidget
- symbol_ : Element
- symbols_ : ElementDB
- symmetric_ : LevMarqFitter1D, TransformationModelLinear
- symmetry_ : EmgFitter1D, EmgModel
- synonyms : ControlledVocabulary::CVTerm
- synonyms_ : DigestionEnzyme, MSPGenericFile, Residue, ResidueModification
- synonyms_separator_ : MSPGenericFile